| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3388 |
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| Symbol | |
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| ID | 8359554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4152056 |
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| End bp | 4153042 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644965561 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003123056 |
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| Protein GI | 256422403 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.470852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAACG GTGATAGAAT GAATTTTGCA GATTTCACAA ACATGGTACC TTTGATCACG
TCATCTTTCG GCAATAACAT GATCGAGCAT ACTTCCTTAA ACAAGTTTTA CCAGCGGGCA
ACCGGAGATC TTCCTGACGG CATCGGAACG GAGAATGGGC ATTTTAATGT TTTTGAAATT
GAAAAGCTGT ATGATAAAAA GACGGGTAAC CGGATTATGC CGTATAGCAG AAGGGACTAT
TATAAGGTCA GCCTCATCCG TGGTCACAGC AGGGCGGAAT ATGCGGATAA AGTGATAGAG
ATTGAAGACA GTGCGCTGCT TTTTGCTACA CCCAGAATTC CTTATCATTG GGTACCTGTA
GACAGCGATC AAACGGGTAT GTTCTGCATT TTTACGGCAG AGTTTCTATC CAGGAATAAT
GCAGGGGTTT TTCTGGATGA ATTGCCCATT TTCAAACCGG GTGCATTGCC GGTATTCAAA
TTGACGCCGG AAGCAGTCGC TGAACTGGAA TATATTTTCC GTAAAATGTT AAGGGAAATT
GCCAGTGATT ATGTCTATAA ATACGATCTC CTGCGCAATC TCCTCCAGGA AATCATTCAC
TACGGACAGA AGCTGCAACC GATGTCTGTA CTGACTGCGC CGCAAAATGC AGCCGACAGG
ATCTCTTCAT TATTTGTAGA ATTACTGGAA AGACAATTCC CGCTGGAATC GCAGCATCAG
CGTTTAGAAC TACGCACTGC GAAAGACTAT GCAGATCGTC TGGCGGTACA TGTCAATCAC
CTCAATAAAG TACTGAAAGC AAAAACAGGT CGTACAACGA CAGATATTAT CAGTGACAGG
ATCACACAGG AAGCGAAGAT CCTGCTGAAA AAGACGGATT GGAGTGTATA TGATATTGGT
TATACCCTCG GATTTGATGA TTTAGCCCAT TTTTCAAATT TTTTTAAAAA ACACGCGAAG
ATCACCGCGC AGAGTTTCCG TTCTTAG
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| Protein sequence | MANGDRMNFA DFTNMVPLIT SSFGNNMIEH TSLNKFYQRA TGDLPDGIGT ENGHFNVFEI
EKLYDKKTGN RIMPYSRRDY YKVSLIRGHS RAEYADKVIE IEDSALLFAT PRIPYHWVPV
DSDQTGMFCI FTAEFLSRNN AGVFLDELPI FKPGALPVFK LTPEAVAELE YIFRKMLREI
ASDYVYKYDL LRNLLQEIIH YGQKLQPMSV LTAPQNAADR ISSLFVELLE RQFPLESQHQ
RLELRTAKDY ADRLAVHVNH LNKVLKAKTG RTTTDIISDR ITQEAKILLK KTDWSVYDIG
YTLGFDDLAH FSNFFKKHAK ITAQSFRS
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