Gene Cpin_3382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3382 
Symbol 
ID8359548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4146754 
End bp4147488 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content48% 
IMG OID644965555 
Producthypothetical protein 
Protein accessionYP_003123050 
Protein GI256422397 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0142115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.996746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAAA AAGCAGATAT AATTTCTCAG CTGCAAAAGG ATATTCTCCG TTTGCAGGGA 
TACAGGTCCG TACCGCAGGA CAATGCGCCT GTAATAGACC TGGGTCCGGT GAATACTGCC
TTTCCGAATG GCGTCTTCCC TACCGGCGTG ATACATGAAT TTCTTTGTCC GCTGACAGAA
CAGGCAGCAG CAACTTCGGG TTTTGTGAGT GCACTTACCG GCTCTTTGAT GCAATTTGGC
GGCGCCTGTA TCTGGATAAG CGTTTCCAGG ACACTCTTTC CTCCTTCATT GAAAACATTT
GGCATTGAGC CACACAGGGT GGTTTTTATT GATCTGCAGC GTACAAAAGA TGCACTCTGG
GCATTGGAAG AAGCCCTGAA ATGTGAAGGA TTAGCTGCCG TTATTGCGGA ATTACCGGAG
ATTGGATTTA CACAGTCGCG CAGATTGCAA CTGGCGGTAG AACAAAGTAA AGTCACCGGC
TTTATCCTGC GCACTTCTTC CAGGAGTGTG AGTACGACCG CTTCCGCAGC CAGGTGGCAG
ATCACACCAT TACCAAGTGC TATGGAAAAT GATATGCCTG GCGTAGGTTA TCCGCGTTGG
CAGATAGAAC TGCTGAAGGT ACGGAACGGG CGGAATGGCG TTTGGAAAAT TGAATGGTCG
GAAGGCCGTT ATACGATTCT GCAGGAGCCC TCTTCCAGTA AAAATGTACA GATACATCAA
TTAAAAGCAG GTTGA
 
Protein sequence
MPEKADIISQ LQKDILRLQG YRSVPQDNAP VIDLGPVNTA FPNGVFPTGV IHEFLCPLTE 
QAAATSGFVS ALTGSLMQFG GACIWISVSR TLFPPSLKTF GIEPHRVVFI DLQRTKDALW
ALEEALKCEG LAAVIAELPE IGFTQSRRLQ LAVEQSKVTG FILRTSSRSV STTASAARWQ
ITPLPSAMEN DMPGVGYPRW QIELLKVRNG RNGVWKIEWS EGRYTILQEP SSSKNVQIHQ
LKAG