Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3382 |
Symbol | |
ID | 8359548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4146754 |
End bp | 4147488 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644965555 |
Product | hypothetical protein |
Protein accession | YP_003123050 |
Protein GI | 256422397 |
COG category | [S] Function unknown |
COG ID | [COG4544] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0142115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.996746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGAAA AAGCAGATAT AATTTCTCAG CTGCAAAAGG ATATTCTCCG TTTGCAGGGA TACAGGTCCG TACCGCAGGA CAATGCGCCT GTAATAGACC TGGGTCCGGT GAATACTGCC TTTCCGAATG GCGTCTTCCC TACCGGCGTG ATACATGAAT TTCTTTGTCC GCTGACAGAA CAGGCAGCAG CAACTTCGGG TTTTGTGAGT GCACTTACCG GCTCTTTGAT GCAATTTGGC GGCGCCTGTA TCTGGATAAG CGTTTCCAGG ACACTCTTTC CTCCTTCATT GAAAACATTT GGCATTGAGC CACACAGGGT GGTTTTTATT GATCTGCAGC GTACAAAAGA TGCACTCTGG GCATTGGAAG AAGCCCTGAA ATGTGAAGGA TTAGCTGCCG TTATTGCGGA ATTACCGGAG ATTGGATTTA CACAGTCGCG CAGATTGCAA CTGGCGGTAG AACAAAGTAA AGTCACCGGC TTTATCCTGC GCACTTCTTC CAGGAGTGTG AGTACGACCG CTTCCGCAGC CAGGTGGCAG ATCACACCAT TACCAAGTGC TATGGAAAAT GATATGCCTG GCGTAGGTTA TCCGCGTTGG CAGATAGAAC TGCTGAAGGT ACGGAACGGG CGGAATGGCG TTTGGAAAAT TGAATGGTCG GAAGGCCGTT ATACGATTCT GCAGGAGCCC TCTTCCAGTA AAAATGTACA GATACATCAA TTAAAAGCAG GTTGA
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Protein sequence | MPEKADIISQ LQKDILRLQG YRSVPQDNAP VIDLGPVNTA FPNGVFPTGV IHEFLCPLTE QAAATSGFVS ALTGSLMQFG GACIWISVSR TLFPPSLKTF GIEPHRVVFI DLQRTKDALW ALEEALKCEG LAAVIAELPE IGFTQSRRLQ LAVEQSKVTG FILRTSSRSV STTASAARWQ ITPLPSAMEN DMPGVGYPRW QIELLKVRNG RNGVWKIEWS EGRYTILQEP SSSKNVQIHQ LKAG
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