Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3373 |
Symbol | |
ID | 8359539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4135674 |
End bp | 4136405 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644965546 |
Product | methyltransferase small |
Protein accession | YP_003123041 |
Protein GI | 256422388 |
COG category | [R] General function prediction only |
COG ID | [COG4123] Predicted O-methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0772935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.241252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAATC ACTATTTCAG TTTCAAGCAA TTTACCGTAT ACCAGGACGC CTGTGCGATG AAAGTCTGCA CAGACGCCTG TGTGCAGGGT GCGTATACCG CTGCCTGGCT CCGGGAGCAA TCTCCGGTCA GCCGTATTTT AGACATCGGT ACAGGTACCG GACTGCTTTC CTTGATGCTG GCGCAGCAAT CTGAGGCGGC TATTACCGGT ATAGAACTGG ATCCCGCTGC CGCAGGACAG GCCCGTACTA ATTTCGATGC TTCTCCCTGG AAGGAACGCT TACAGGTGAT AGAGACGGAT GCCAAACAAT TGCCGGCAGG GGAGCCGTAT GATTTTATCG TCACGAATCC TCCTTTTTAT GAGGGTGACC TGAAAAGCGT CGATCAACTG CGTAATCAGG CTATGCACGC CATCACACTG GATTATAGTG AGTTGCTACA GGTTATAGCT ACCCAGCTGT CGGCAGCTGG TCGTTTTTCT GTATTACTGC CGTATAAGCC CTTTGCGGAG TTTAAGGCAT TGGCGGAGAC AACAGGGTTC TCTTTACAGG AGGTGCTGCA TGTAAAACAA AGTGAACAAC ATGATTATTT CCGCAGTGTA GGTATTTTCG GCAGGAAAGT GACTGTTACG CTGCCTTCCA CCGAACAGTT CATGTCCATA CGGGAAGCAG ATAAGAAAAC ATATACTGCC GCGTTTATAG GGCTTTTAAA GCCTTATTAT CTTTTCCTGT AA
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Protein sequence | MPNHYFSFKQ FTVYQDACAM KVCTDACVQG AYTAAWLREQ SPVSRILDIG TGTGLLSLML AQQSEAAITG IELDPAAAGQ ARTNFDASPW KERLQVIETD AKQLPAGEPY DFIVTNPPFY EGDLKSVDQL RNQAMHAITL DYSELLQVIA TQLSAAGRFS VLLPYKPFAE FKALAETTGF SLQEVLHVKQ SEQHDYFRSV GIFGRKVTVT LPSTEQFMSI READKKTYTA AFIGLLKPYY LFL
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