Gene Cpin_3373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3373 
Symbol 
ID8359539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4135674 
End bp4136405 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content49% 
IMG OID644965546 
Productmethyltransferase small 
Protein accessionYP_003123041 
Protein GI256422388 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0772935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.241252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAATC ACTATTTCAG TTTCAAGCAA TTTACCGTAT ACCAGGACGC CTGTGCGATG 
AAAGTCTGCA CAGACGCCTG TGTGCAGGGT GCGTATACCG CTGCCTGGCT CCGGGAGCAA
TCTCCGGTCA GCCGTATTTT AGACATCGGT ACAGGTACCG GACTGCTTTC CTTGATGCTG
GCGCAGCAAT CTGAGGCGGC TATTACCGGT ATAGAACTGG ATCCCGCTGC CGCAGGACAG
GCCCGTACTA ATTTCGATGC TTCTCCCTGG AAGGAACGCT TACAGGTGAT AGAGACGGAT
GCCAAACAAT TGCCGGCAGG GGAGCCGTAT GATTTTATCG TCACGAATCC TCCTTTTTAT
GAGGGTGACC TGAAAAGCGT CGATCAACTG CGTAATCAGG CTATGCACGC CATCACACTG
GATTATAGTG AGTTGCTACA GGTTATAGCT ACCCAGCTGT CGGCAGCTGG TCGTTTTTCT
GTATTACTGC CGTATAAGCC CTTTGCGGAG TTTAAGGCAT TGGCGGAGAC AACAGGGTTC
TCTTTACAGG AGGTGCTGCA TGTAAAACAA AGTGAACAAC ATGATTATTT CCGCAGTGTA
GGTATTTTCG GCAGGAAAGT GACTGTTACG CTGCCTTCCA CCGAACAGTT CATGTCCATA
CGGGAAGCAG ATAAGAAAAC ATATACTGCC GCGTTTATAG GGCTTTTAAA GCCTTATTAT
CTTTTCCTGT AA
 
Protein sequence
MPNHYFSFKQ FTVYQDACAM KVCTDACVQG AYTAAWLREQ SPVSRILDIG TGTGLLSLML 
AQQSEAAITG IELDPAAAGQ ARTNFDASPW KERLQVIETD AKQLPAGEPY DFIVTNPPFY
EGDLKSVDQL RNQAMHAITL DYSELLQVIA TQLSAAGRFS VLLPYKPFAE FKALAETTGF
SLQEVLHVKQ SEQHDYFRSV GIFGRKVTVT LPSTEQFMSI READKKTYTA AFIGLLKPYY
LFL