Gene Cpin_3365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3365 
Symbol 
ID8359531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4127446 
End bp4128357 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content45% 
IMG OID644965538 
Producthypothetical protein 
Protein accessionYP_003123033 
Protein GI256422380 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.575675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.317417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAATC TAAGTTTATT GAAGAATCGT TTATCTCGTG CTGCATGGAA AAGAGTGGTT 
GTTGTTTTAT TGATATGTGC CCCTTTTAGC GGTTTCGCGC AATACTGGCA GGCGGGTGGT
TTCATCGGTA CGAGTAACTA TAGCGGCGAC CTTGTACAAA CAAAAGTTGA TCTGAAATAC
ACTCGTTTTG CACTTGGTGT ATTTGTAAAA AGAGATATCA ACCGTTACCT CACGATCCGT
GGGGGCCTTT CCTACGGAAG GATTGCGGGC GCCGACAGTA CCAATAGAGA TACTTTCCTG
TTGAAGCGTA ACCTTAGTTT CCGTTCTCCG ATATGGGAAG GACAACTGGG CTTTGAATTT
AATTTCCTGG ACCTGGACGA GAAAAAGATC ACACCATATG TATTCGCCAG CGTAGCGTTG
TTTAGTTTTT ATCCGACAAC GAAAGACTCG CTCGGTAATA CCGTGAATCT CCGTCCCCTG
GGTACAGAAG GACAAGGGTT AGCAGCTTAT CCTACGCGTA AGGAATACAA TCTCCGCCAG
ATCTCTATTC CGTTTGGTGC AGGTGTGAAA ATACTCCTGA CGGAGAACTG GATTGCGGGC
TTCGAATTTG GTCTGCGTAA GACGTTTACC GATTACCTGG ATGATGTGAG TCTGACGTAT
GTAGACAGAA ATACGCTGGT AAGAACACGC GGACAAAAAG CGGCTAACTT TGCTTATCGT
GGTGATGAAG TGACGCTCGG TAGTCATGTT ACACCAGGTA CTTATCCTGC GGATGGCACT
ACACGTGGTT CTGATAAATA TAAAGACTGG TATATATTTT CAGGCTTCAC ACTCAGTTAT
CGCTTCGGTG GGGGCAGCAA TGCGCATAAT AACTGGAAAA GACAGAAAGT ATCACAGTGT
CCAAGATTCT AA
 
Protein sequence
MPNLSLLKNR LSRAAWKRVV VVLLICAPFS GFAQYWQAGG FIGTSNYSGD LVQTKVDLKY 
TRFALGVFVK RDINRYLTIR GGLSYGRIAG ADSTNRDTFL LKRNLSFRSP IWEGQLGFEF
NFLDLDEKKI TPYVFASVAL FSFYPTTKDS LGNTVNLRPL GTEGQGLAAY PTRKEYNLRQ
ISIPFGAGVK ILLTENWIAG FEFGLRKTFT DYLDDVSLTY VDRNTLVRTR GQKAANFAYR
GDEVTLGSHV TPGTYPADGT TRGSDKYKDW YIFSGFTLSY RFGGGSNAHN NWKRQKVSQC
PRF