Gene Cpin_3351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3351 
Symbol 
ID8359517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4115827 
End bp4116273 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content43% 
IMG OID644965524 
ProductFe-S metabolism associated SufE 
Protein accessionYP_003123019 
Protein GI256422366 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.109894 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCA AAGAACAACA GGACGAACTT ATATCAGACT TCTCCTTTAT GGAGAACTGG 
ATGGATAAAT ACGAGCATAT TATTCAACTG GGCAAGGAAC TGCCGCTGAT AGACGAAAAA
TATAAAACGC CTGATCACCT GATCAAAGGT TGTCAGTCGC AGGTATGGCT GCATACGGAA
ATGCAGGACG GTAAACTGGT CTTTACAGCA GACAGTGACG CCGTGATTAC CAAAGGACTG
GTTAGTCTGA TGGTAACCGT ATTTTCCGGT CACACGCCTA AAGAGATCGC AGAATCTGAA
ATATTCTTTA TAGACGCTAT CGGTTTGAGT AATCATCTCT CCCCTACCCG TTCTAACGGA
CTACTGAGTA TGCTCAAACA GATTAAGTTA TATGCAGTTG CCTACGAGGC AAAATCTCAA
TCACAAAAAA ACGGCACAGA ACTATGA
 
Protein sequence
MTIKEQQDEL ISDFSFMENW MDKYEHIIQL GKELPLIDEK YKTPDHLIKG CQSQVWLHTE 
MQDGKLVFTA DSDAVITKGL VSLMVTVFSG HTPKEIAESE IFFIDAIGLS NHLSPTRSNG
LLSMLKQIKL YAVAYEAKSQ SQKNGTEL