Gene Cpin_3347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3347 
Symbol 
ID8359513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4113799 
End bp4114305 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content47% 
IMG OID644965520 
Producttransport-associated 
Protein accessionYP_003123015 
Protein GI256422362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0766802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAACA AACAATTGAG CATTGCGTTC CTTTGCCTGG CACTGGCTTT CATGGTAGCT 
TGTAAAGGCA AACCTTCCGA TACGCAGATC CAGGCTAAAG TAACTGAACA ACTCAGTGGT
ATGCCTGAAG TTACGGCTGA CGTAAAAGAA GGTGTTGTAA CCCTGGCGGG TAATGTACCT
GACGATGCAG CCAGAACTGC TGTAGAAACT AAAGTAGCGG CAGTAGAAGG TGTTAAAAGC
ATTACGAATA ACATCATGGT TACTCCTCCT GCTCCACCGG CACCTGTTGT GGATACAACC
GCTGCACCAG TAAATGCTGC TGATGACGCA CTTCGTACAG GGGTAACTGA TATCACCAAA
GACTTCCCTG GCGTGGATGT AAAAGTAGAC GCCGGCGTTG TGACGGTTAC CGGTGAATTG
TCTGCTGCCA AATGGAAAAC GCTGAAACAG GCGCTTGATG GTCTGCATCC GAAGAAAGTA
GATGCTTCTG GTCTGAAAGT AAAATAA
 
Protein sequence
MRNKQLSIAF LCLALAFMVA CKGKPSDTQI QAKVTEQLSG MPEVTADVKE GVVTLAGNVP 
DDAARTAVET KVAAVEGVKS ITNNIMVTPP APPAPVVDTT AAPVNAADDA LRTGVTDITK
DFPGVDVKVD AGVVTVTGEL SAAKWKTLKQ ALDGLHPKKV DASGLKVK