Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3347 |
Symbol | |
ID | 8359513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4113799 |
End bp | 4114305 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644965520 |
Product | transport-associated |
Protein accession | YP_003123015 |
Protein GI | 256422362 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0766802 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAACA AACAATTGAG CATTGCGTTC CTTTGCCTGG CACTGGCTTT CATGGTAGCT TGTAAAGGCA AACCTTCCGA TACGCAGATC CAGGCTAAAG TAACTGAACA ACTCAGTGGT ATGCCTGAAG TTACGGCTGA CGTAAAAGAA GGTGTTGTAA CCCTGGCGGG TAATGTACCT GACGATGCAG CCAGAACTGC TGTAGAAACT AAAGTAGCGG CAGTAGAAGG TGTTAAAAGC ATTACGAATA ACATCATGGT TACTCCTCCT GCTCCACCGG CACCTGTTGT GGATACAACC GCTGCACCAG TAAATGCTGC TGATGACGCA CTTCGTACAG GGGTAACTGA TATCACCAAA GACTTCCCTG GCGTGGATGT AAAAGTAGAC GCCGGCGTTG TGACGGTTAC CGGTGAATTG TCTGCTGCCA AATGGAAAAC GCTGAAACAG GCGCTTGATG GTCTGCATCC GAAGAAAGTA GATGCTTCTG GTCTGAAAGT AAAATAA
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Protein sequence | MRNKQLSIAF LCLALAFMVA CKGKPSDTQI QAKVTEQLSG MPEVTADVKE GVVTLAGNVP DDAARTAVET KVAAVEGVKS ITNNIMVTPP APPAPVVDTT AAPVNAADDA LRTGVTDITK DFPGVDVKVD AGVVTVTGEL SAAKWKTLKQ ALDGLHPKKV DASGLKVK
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