Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3346 |
Symbol | |
ID | 8359512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4113356 |
End bp | 4113778 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644965519 |
Product | SH3 type 3 domain protein |
Protein accession | YP_003123014 |
Protein GI | 256422361 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.073163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTAC AGGACAAATA CAAAGAACTG ATAGATACTG CCAGATCATC CGGCACTGAC AATCTTCAGG TGAATGAAAC GGATGGCGTA CTGCATATCA GTGGCGAAGC GCCGAGTGGT GCAGTAAAGG ACAATCTCTG GAATATTTAT GGGAAGATTG ATCCGAATTT TCTTACAGGT GATGTCGTAA TGGATATCAA AGTAGCAACC GCGGTGGAAG GTGCGAAGCT GGAAGTCGTG ACGCAATCGT CTAATCTGAA TGTGCGGAAA GGCCCGGGAA CGGATCAGCC GATTATCGGG AAAGCCGGGC ATAAAGAGAT TGTGTCATTG GTGAGTAAGC ATAGTGATCA ATGGTGGTTG ATCAGAACGA AAGACGGCGA GGAAGGATAT GCGCATGCGC AGTATCTGCG GCCGGTTGAG TAG
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Protein sequence | MSLQDKYKEL IDTARSSGTD NLQVNETDGV LHISGEAPSG AVKDNLWNIY GKIDPNFLTG DVVMDIKVAT AVEGAKLEVV TQSSNLNVRK GPGTDQPIIG KAGHKEIVSL VSKHSDQWWL IRTKDGEEGY AHAQYLRPVE
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