Gene Cpin_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3346 
Symbol 
ID8359512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4113356 
End bp4113778 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content48% 
IMG OID644965519 
ProductSH3 type 3 domain protein 
Protein accessionYP_003123014 
Protein GI256422361 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.073163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTAC AGGACAAATA CAAAGAACTG ATAGATACTG CCAGATCATC CGGCACTGAC 
AATCTTCAGG TGAATGAAAC GGATGGCGTA CTGCATATCA GTGGCGAAGC GCCGAGTGGT
GCAGTAAAGG ACAATCTCTG GAATATTTAT GGGAAGATTG ATCCGAATTT TCTTACAGGT
GATGTCGTAA TGGATATCAA AGTAGCAACC GCGGTGGAAG GTGCGAAGCT GGAAGTCGTG
ACGCAATCGT CTAATCTGAA TGTGCGGAAA GGCCCGGGAA CGGATCAGCC GATTATCGGG
AAAGCCGGGC ATAAAGAGAT TGTGTCATTG GTGAGTAAGC ATAGTGATCA ATGGTGGTTG
ATCAGAACGA AAGACGGCGA GGAAGGATAT GCGCATGCGC AGTATCTGCG GCCGGTTGAG
TAG
 
Protein sequence
MSLQDKYKEL IDTARSSGTD NLQVNETDGV LHISGEAPSG AVKDNLWNIY GKIDPNFLTG 
DVVMDIKVAT AVEGAKLEVV TQSSNLNVRK GPGTDQPIIG KAGHKEIVSL VSKHSDQWWL
IRTKDGEEGY AHAQYLRPVE