Gene Cpin_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3330 
Symbol 
ID8359496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4094315 
End bp4094794 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content51% 
IMG OID644965503 
Productprotein of unknown function DUF395 YeeE/YedE 
Protein accessionYP_003122998 
Protein GI256422345 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0487159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00106524 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATACAG ACTTTGAAGT GGTGAGCACC TCCACTACTA ACAACGCTCC TGCAAAAAAG 
ACCCCCTGGT GGTCTCAGCT GCAATTCCTG GCCGCTGGTA TATTCTTCGG GATCATCCTG
ATCAAATCAG AAGTAATGTC CTGGTACCGG ATACAGGAAA TGTTCCGCTT ACAATCCTTT
TACATGTATG GCGTCATCGG TTCGGCGGTC GTGACAGGAA TCATCTCCGT GCTGATCATC
AAAAAGACCG GGGCTAAAAC GCTGTACGGC GAACCTATAA CCTTCCAACC GAAGTCCTTT
AATAAGGGCC AGATCTTTGG CGGATTGCTC TTCGGATTTG GCTGGGCATT GACAGGCGCC
TGTCCGGGAC CATTGTTTGC GCAGATAGGG GCCGGATTCT CCGTGGTAAT CGTTACGCTC
TTTAGCGCAA TACTGGGTAC ATGGGTGTAT GGTAAGCTGC GGGACCGCCT GCCGCATTAG
 
Protein sequence
MDTDFEVVST STTNNAPAKK TPWWSQLQFL AAGIFFGIIL IKSEVMSWYR IQEMFRLQSF 
YMYGVIGSAV VTGIISVLII KKTGAKTLYG EPITFQPKSF NKGQIFGGLL FGFGWALTGA
CPGPLFAQIG AGFSVVIVTL FSAILGTWVY GKLRDRLPH