| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3316 |
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| Symbol | |
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| ID | 8359482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4080762 |
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| End bp | 4081562 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644965489 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_003122984 |
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| Protein GI | 256422331 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.635964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000217652 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCAGA AAGCAAAACA AAAGATCAAG GTCGGCATCT TTGCTACGGT CGCCTTTGCA
TTATTGCTTA TAGGCGTTTT CCTCATTGGG AGGAATAAGA ATATGTTTGG TAATACATTT
TTGCTCTATG GTACCTTTAA AAATGTAGGC GGACTACAAG CAGGTAATAA TGTCCGCTTT
GTAGGGATCG ATGTGGGTAC TGTAGAAAGT ATCGAAATAT TATCTGATAC GACGGCCCGT
GTAGCATTGC GTATCAAGGA GAAGGTACAG CCATTTATCA AAAAAGGGGC AGTGGCCGGT
ATCAGTTCTG ATGGATTGAT GGGAGATAAG CTGATAACCA TCAGTTCCGG CAAGGAAAAT
GCGGAACCGG TAAAAGATGG TGATTCTGTA CACGCGGTAG ATCCGCTAGA CTATGACCAG
GTGATCAACA GGGTGTCTGG TGTGGCGGCT AATGCCGAGG TCATTACGGA GCAGCTGGCC
GATATTGCCA CCAGGATCAA CCATGGAGAG GGTAGTATAG GACGGCTGTT GTATAGTGAT
AGTCTGGCGA CCAGCCTGGA AGGTACCGTA ACGGAAGCCA AGAGAACGGT GAGGTCCATA
CGTAAAGGAT CGGATGGATT TAGTGAAAAT ATGGAAGCTT TAAAACATAA TTTCCTGTTG
CGTGGTTATT ATAAGAAGAA AGAGAAGGCA GCAAAAAAAG AGGCAGAGAA AAAAGAGAAG
GAAGCAGAGA GAAAGGACAA TAATCGTAAG AAAAGCGGAA ACAAAGATTC TGCCAGCCTC
AGGGTGCCTA AAGAAGGATA A
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| Protein sequence | MQQKAKQKIK VGIFATVAFA LLLIGVFLIG RNKNMFGNTF LLYGTFKNVG GLQAGNNVRF
VGIDVGTVES IEILSDTTAR VALRIKEKVQ PFIKKGAVAG ISSDGLMGDK LITISSGKEN
AEPVKDGDSV HAVDPLDYDQ VINRVSGVAA NAEVITEQLA DIATRINHGE GSIGRLLYSD
SLATSLEGTV TEAKRTVRSI RKGSDGFSEN MEALKHNFLL RGYYKKKEKA AKKEAEKKEK
EAERKDNNRK KSGNKDSASL RVPKEG
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