| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3314 |
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| Symbol | |
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| ID | 8359480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4079223 |
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| End bp | 4079960 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965487 |
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| Product | protein of unknown function DUF140 |
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| Protein accession | YP_003122982 |
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| Protein GI | 256422329 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.602612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000176122 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAATTG TCGGCGATCA GGTATTGTTT ACCGGTCGCT TTGCCCGGAA TATTTTCCGG
GGAGGATTTG AATGGGGAGA ATTTATCCGC CAGTGTTTTA TTGTTGGTTA TCTGTCCGTC
GGCCTGGTTG GTATTACAGG GTTCATCATC GGGCTTGTAA TGACGTTACA GACGCAACCT
ACTTTAAAAG ACTTTGGCGC AGAAAGTTAT GTACCCGGTA TGGTGTCCAT TTCCATTATA
CGTGAAATAG GACCTGTGAT CATTGCGTTG ATCTGTGCAG GTAAAATAGC ATCGAGTATC
GGGGCAGAAC TGGGTAGTAT GAAAGTGACG GAACAGATAG ATGCCATGGA GGTCTCGGCC
GCTAATCCGG TGCAGTATCT CGTCGTAACG CGCATCCTTG CCTGCACAAT CATGGTACCC
TTACTAACGA TTATGGCTGA TGGGCTGGCC ATGTTAGGTG GATGGGTAGG CGTCAACATA
CAGGATCACG TCAGTGCAAC CCTCTTTTTT AAGAAATCTT TCAAAGCACT GGAATTTAGC
GACGTCGTGC CTTCTGTGAT AAAGACATTT TTCTTCGGAT ATGCGATCGG TTTTGTCGGA
TGTTATAAAG GATATCATTC CGCCCGTGGT ACGGAAAGTG TGGGAAAAGC GGCTAACTCC
GCTGTGGTAA GCGCCTCTCT CTGGATTATC CTGATAGATG CGATAGCAGT ACAGATCACC
AACCTGATTT ATTATTAA
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| Protein sequence | MEIVGDQVLF TGRFARNIFR GGFEWGEFIR QCFIVGYLSV GLVGITGFII GLVMTLQTQP
TLKDFGAESY VPGMVSISII REIGPVIIAL ICAGKIASSI GAELGSMKVT EQIDAMEVSA
ANPVQYLVVT RILACTIMVP LLTIMADGLA MLGGWVGVNI QDHVSATLFF KKSFKALEFS
DVVPSVIKTF FFGYAIGFVG CYKGYHSARG TESVGKAANS AVVSASLWII LIDAIAVQIT
NLIYY
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