| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3308 |
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| Symbol | |
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| ID | 8359474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4072069 |
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| End bp | 4073829 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965481 |
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| Product | ABC transporter related |
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| Protein accession | YP_003122976 |
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| Protein GI | 256422323 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.682367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000512121 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTACA ACCTGAATAA TACAGATACA AACGAACAGC AGAGTACTTC GGGGAAACGC
CTCCTGAAAT TACTGGCCTA TATAAAAACA GAACACCGTG CATTGCTGGG TGTATTCGGT
ATCATGGTGA TCAGCCAGAC ATTAACCATC ACGGTTCCAT ATGTGGTAGG TTATACGATC
GATCATTATG TAGCGCACAA GGACTTTTCC GGCATACTCC GTTGTGCAGG TCTTCTGCTG
GCTATATTCC TGGTGAACCT GATCTTTGCC TACTCCCAGA CCCTGATGAT GGGAAAAGTA
GGGCAGCGTA TGCTTTATAT GCTGCGAAGT GCATTATTTG TGAAATTGCA GGAACTGCCG
ATCGCCTTCT TTAATCAGAA TAAAACCGGT GACCTGATCT CCCGTATCAA TAACGATACT
GATAAGATGA ACCAGTTCTT TTCTCAGTCC CTCGTACAGT TTGCAAGTGG TATCATGTCC
ATGATCGGCG CGGGTATTTT CCTGTTGTCT ATCAATTGGA AACTGGGTAT CGCTACACTG
ACACCGGCTA TTTTGCTGTT GCTTTTTACC CGTATCCTTT CTCCGTTGGT GAAGAAAAGA
AACGCTGCCA ACATGAAAAG TACCGGTGGT ATGAGTGCTG AAATACAGGA AAGTCTGAGC
AATTTTAAAG TGATCATCGC ATTCAATCGC CGTGATTATT TCCGCAAACG CTTTGACCAG
GTCAATCAGC AGAACTATAA AACCGCTACT GCTGCAGGTG TGCTGAATAA TATCTTCAAC
CCGGTGTTCT CTTTCTGCTC CCAGATAGCC ATGTTGGCCG TACTGGCCTA TGGTATCTAT
CTGATATCAG CAGGTGAGTT CACGGTAGGA CTGCTGATCA GTTACCTGTC TTTCTCCACT
TATTTCTATA ACCCGATCCG TCAGCTGGCT ATTTTATGGA CTAACTTCCA GATGGCGATG
GCAGGTTGGG ACAGGATCTC CCAGATCCTC GAACTGGAAA CAGATCTGAA AGTAATTCCT
GCCGGACCAG CAAAAGAGAA TGCACCGCTG ATCAGTTTTC AGCATGTACA GTTCCGCTAT
GCCGATAGTA AGGAGATCCT GAAAAATGTC AGCTTCAACA TGGAGCAGGG TAAAACATAT
GCCCTGGTGG GACCTACAGG CGGAGGTAAA ACAACTACAG CTTCACTGAT TGCACGTTTG
TATGATCCTA CCGAAGGACA GGTATTGCTG AATGGCCGCG ATATCCGTTC TTATACACCG
GAAGAGCGTA CCCGTAAAAT CGGGTTCATT TTGCAGGAAC CATTCCTTTT CTCCGGTACG
ATCCAGGAGA ACATAGTTTA TGGCAATCCG ACCTATGCTG ATTACAGCGC AACGCAATTA
CGGGAAGTGA TGGAAAAAGT AGGGCTGGAC GCCCTGCTGG AACGCTTTGA AGATGGTCTG
GCTACAAACA TCGTTTCTGG TAATGACGGT ATCAGCCTTG GACAGAAACA GCTCATAGCC
TTTATGCGGG CGGTATTACG TAATCCGGAC CTGTTGGTAC TGGATGAAGC CACTGCCAAT
ATCGATACGG TAACAGAACA ACAACTGGAA GCCGTATTGA AAAAGCTGCC GGCACATACG
ACCCGCGTGA TCATTGCGCA CAGATTGAAT ACCATTGAAA ACGCAGATGA AATCTTCTTC
GTGAACAATG GCGAGATTAC GAGAGCGGGT TCATTTGATC ATGCGATGAA TATGCTGTTG
CAGCATGAGC GAAACACGTA A
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| Protein sequence | MNYNLNNTDT NEQQSTSGKR LLKLLAYIKT EHRALLGVFG IMVISQTLTI TVPYVVGYTI
DHYVAHKDFS GILRCAGLLL AIFLVNLIFA YSQTLMMGKV GQRMLYMLRS ALFVKLQELP
IAFFNQNKTG DLISRINNDT DKMNQFFSQS LVQFASGIMS MIGAGIFLLS INWKLGIATL
TPAILLLLFT RILSPLVKKR NAANMKSTGG MSAEIQESLS NFKVIIAFNR RDYFRKRFDQ
VNQQNYKTAT AAGVLNNIFN PVFSFCSQIA MLAVLAYGIY LISAGEFTVG LLISYLSFST
YFYNPIRQLA ILWTNFQMAM AGWDRISQIL ELETDLKVIP AGPAKENAPL ISFQHVQFRY
ADSKEILKNV SFNMEQGKTY ALVGPTGGGK TTTASLIARL YDPTEGQVLL NGRDIRSYTP
EERTRKIGFI LQEPFLFSGT IQENIVYGNP TYADYSATQL REVMEKVGLD ALLERFEDGL
ATNIVSGNDG ISLGQKQLIA FMRAVLRNPD LLVLDEATAN IDTVTEQQLE AVLKKLPAHT
TRVIIAHRLN TIENADEIFF VNNGEITRAG SFDHAMNMLL QHERNT
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