| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3297 |
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| Symbol | |
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| ID | 8359463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4061241 |
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| End bp | 4064066 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644965470 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003122965 |
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| Protein GI | 256422312 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000222307 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACTG TAATCAGAAG ATCCTGTAAG CTACTGCCAG CTATCCTGTC AATGCTGCTT
TTACAGCCGG CTGTCGCCCA ACAACCTGCC ATACCGCATA CTGACACCCT GCGCCCTGAC
GTATGGCCTG CACCGGGTAA CAGGCTGCAT CAGCCCTGGA CCCGCTGGTG GTGGGTAGGA
AGTGCGGTAG ATGAGAAAAG TCTGGATGCG TCGTTGAAGA CATTGCATGA TGCGGGATTT
GGCGGTGTTG AAATAGCCCC GATCTATGGG GCGAAAGGAT ATGAATCCCG ATACGTTAGT
TTTCTCTCGC CACAGTGGAT CGACCTGCTG CGCTATACCG TACAAACAGC TGCCGGATAT
AATATGGGCG TAGATCTGAC CACCGGTACG GGATGGCCGT TTGGCGGTCC GCAGCTCACA
AAAGCACAAG CCGCTTCCCG TCTCATTATA CAAACCTATC CTGTAAAAGG CGGTACTCCC
TTTACAGCAC AGATACGGAT CAACGATAAT AAACAACAAG GGGCTGCTTT ACAGGCCCTG
ACCGCTTACA ATGGCAAACA ACGTATCTCC CTGATCAGTA AAGTAGATAA GGAGGGTAAA
CTCCAATGGA TACCGCCTGC GGGTGACTGG ACCCTGTATG CTTTGTTTAG CGGCTGGACG
CTGCAGCAGG TAAAAAGGGC TGCTCCGGGT GGAGAAGGAT ATACCCTGGA TCATCTTTCT
GCCACTGCCT TACCGGTATA CCTGCAACGT TTTGATACTG CCTTTAAAGG CAAGTCGCCG
GGTGTACGCT CCTTCTATAA CGATAGCTAT GAAGTATATA ACGCAGACTG GACGCCTGCG
TTTTTCAGCG CCTTTAAAAC ACACAGGGGC TATGACCTCC GGGAATACCT GCCGGAACTC
ATCAGCGAAG AGAAGAGCGA AACGGCAGGC AGGGTAAAGT CTGACTACCG CGAAACCATG
TCCGAATTAC TCCTTGACAA TTTTACTCGT CCCTGGACCC AATGGGCACA TCGCTACAAT
AGTGTGTCAA AGAACCAGGC GCATGGCTCT CCCGGTAATC TCCTTGATCT GTACGCAGCA
GTCGATATCC CTGAATGCGA AACCTTCGGC TCTACTTATT TCCCGATCCC CGGACTCAGA
AGAGACAGTG CCGATATCCG GATTGTAGCT CCTGATCCGG TTATGTTGAA ATTCGCCTCC
TCCGCTGCGC ATGTAACAGG ACATCCCCTG GTGTCCTGTG AGACATTCAC CTGGCTGACG
GAGCATTTCA AGACCTCCCT TTCCCAGTGT AAACCTGAAG TGGAACAGGC ATTTCTGGCC
GGTGTCAATC ATGTATTTTA TCATGGGAAT ACCTTTTCTC CGCCGGATGT ACCCTGGCCA
GGCTGGTTGT TCTATGCCTC GGTCAATTTC GTACCTACTA ATAGTTGCTG GCCGCACCTG
ACAGGACTGA ACAACTACAT TTCCCGGGTA CAATCCGTAC TACAGACCGG CATCCCTGAC
AATGAACTGC TGATCTACTG GCCGGTATAT GATTGCTGGG AAAATCCCAA AGGGAAAGAT
TTGCCATTGA AAGTCCATGA TATCGATGAA TGGCTGCACC CTACACCTTT CTATAAACAG
GTAAAAAGTT TGCAACAGGC AGGGTATTCA CTGGATTTTA TTTCAGATAA ACAACTGGGC
AAGACGCTGG TGCAGGGAAG AAAACTCATT ACGAGTACCA ATGCAGCCCC CTATAAGGTG
CTGATCATTC CTGCAATGAA ACTTATGCCC CTGCAGACAT TTCAGCAGAT CATCAAACTT
GTAGAAGCGG GAGCTACTGT CATCTTTGAA TCGATGCCGG AAGATGTTCC TGGTCTGCAT
GATCTTGATA AACGCAGACA GCAGCTGAAA GCACTGCAGC AAAAAGTGAA AGGGGCTTTA
TCAGGCAAAA TAGCCGGCAC CAGGCTGGGA AAAGGCACTA TATACAACTA TGACGGGATA
CAGGAAGCCT TACACATACA GCATATCGAT GGAGAAAAAC TAACAGCGAA AGGCTTACAG
TTTATCCGCA GAAAAGACAA AGACAGAACC TGGTATTATA TCGTCAATCA CACGGCGGAT
GCTGTAGATG ATGCGGTCCC TTTTAACCAG ATGGGTGCTG AAGATACCGT CTTACTCCTC
GATCCGATGA CAGGAGTATA TGGTCCCGCA ACAGTGGGCC ATCACCATGT GAATGATGTG
GTCAGGATCC AGTTGCAACC CGGCCAGTCG CTGATAGTAA GAACCGGTCC GGTCACTGCC
GCAGAGCAGG CGGTTGGCAA CTGGAGATAC CTGAATAAAC CAGGAACGCC GCTTCCTTTA
TCGGGCAAAT GGGACCTGAC CTTTACCCAG GGAGGCCCTT TTAAGCCCGC CGACCGCCAA
TTGGACCAGC TGGTATCCTG GACAAGTCTT TCCGATACCG CAGCAGCTTC CTATAGTGGT
TCAGCGGTTT ATACCCAGAC ATTTACCCTG CCGGATAAGC TGGAAAAGGA ATATCTGCTG
GACCTGGGGA AAGTGCACGA AAGTGCCAGG GTCACCATCA ACGGACAAGA CGCCGGTATC
TACTGGGCCA TTCCTTTCCA GGGAAGGGTG GGGCAATATC TGCGTCCAGG TAAAAATGAG
ATCAGGATAG AAGTAGCCAA TCTGATGGCC AACCGGATCC GTTATATGGA TCAACATGGC
ATTCCCTGGC GAAACTATCA TGAGATCAAT TTCGTCAATA TCAATTATAA GTCTTTTGAT
GCTGCAGGCT GGCCCCTGCA GGCTTCTGGT CTGATCGGTC CGGTCACATT GATCCCCCAT
CAATAG
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| Protein sequence | MKTVIRRSCK LLPAILSMLL LQPAVAQQPA IPHTDTLRPD VWPAPGNRLH QPWTRWWWVG
SAVDEKSLDA SLKTLHDAGF GGVEIAPIYG AKGYESRYVS FLSPQWIDLL RYTVQTAAGY
NMGVDLTTGT GWPFGGPQLT KAQAASRLII QTYPVKGGTP FTAQIRINDN KQQGAALQAL
TAYNGKQRIS LISKVDKEGK LQWIPPAGDW TLYALFSGWT LQQVKRAAPG GEGYTLDHLS
ATALPVYLQR FDTAFKGKSP GVRSFYNDSY EVYNADWTPA FFSAFKTHRG YDLREYLPEL
ISEEKSETAG RVKSDYRETM SELLLDNFTR PWTQWAHRYN SVSKNQAHGS PGNLLDLYAA
VDIPECETFG STYFPIPGLR RDSADIRIVA PDPVMLKFAS SAAHVTGHPL VSCETFTWLT
EHFKTSLSQC KPEVEQAFLA GVNHVFYHGN TFSPPDVPWP GWLFYASVNF VPTNSCWPHL
TGLNNYISRV QSVLQTGIPD NELLIYWPVY DCWENPKGKD LPLKVHDIDE WLHPTPFYKQ
VKSLQQAGYS LDFISDKQLG KTLVQGRKLI TSTNAAPYKV LIIPAMKLMP LQTFQQIIKL
VEAGATVIFE SMPEDVPGLH DLDKRRQQLK ALQQKVKGAL SGKIAGTRLG KGTIYNYDGI
QEALHIQHID GEKLTAKGLQ FIRRKDKDRT WYYIVNHTAD AVDDAVPFNQ MGAEDTVLLL
DPMTGVYGPA TVGHHHVNDV VRIQLQPGQS LIVRTGPVTA AEQAVGNWRY LNKPGTPLPL
SGKWDLTFTQ GGPFKPADRQ LDQLVSWTSL SDTAAASYSG SAVYTQTFTL PDKLEKEYLL
DLGKVHESAR VTINGQDAGI YWAIPFQGRV GQYLRPGKNE IRIEVANLMA NRIRYMDQHG
IPWRNYHEIN FVNINYKSFD AAGWPLQASG LIGPVTLIPH Q
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