Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3293 |
Symbol | |
ID | 8359459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4057044 |
End bp | 4058312 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644965466 |
Product | amine oxidase |
Protein accession | YP_003122961 |
Protein GI | 256422308 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1231] Monoamine oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0007527 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000210093 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCACAT CAGAAGAAAT TATCATTATA GGGGCTGGCG CCGCCGGCCT CCTTGCAGCC AGGGAATTAT CTGCACATCA TAGCGTTACC GTGCTGGAAG CCCGGGATAT GATCGGAGGA AGGATACAGA CCGTTTACCG GGATGGTGTC AAATCCGCCG AAACCGGCGC TGAATTCGTA CACGGTGAGT TACCCATCAC ACTCGGTCTG CTGAAAGAAG CAGGACTCTC CTACTATCAC ATTTACGGAA AAATGTTCCA GGTGCGGGAC GGTAAATGGG ATGCCCGTTA CGAAATGATC GAGGATTGGG ACGGACTGCT GGAAAAAATG AGCAGCATCC CGACAGATAC GACCATGCAG GCGTTCCTGG ATGAACAATA TCCCGTGGAA CAGTATGTCA GTCTGCACGA AAGCGTGAAG TCCTTCGTAC AGGGTTACGA CCTCGCCGAT ATGACCAGGG TGAGCGTAAA AGCCCTTTAC AGTGAATGGA CAAACGAAAG TGAGAATAAC TTCAGGATCG ACCAGGGTTA TACCGCCATG GTCCGTTACC TGGAAGACGT TTGCCTCCGT CAACAGGCCC GTATTGTTAC CAGTGCAGTA GTACGCCATA TTGAGTGGTC AGCTGGTAAG GTAACCGTCA CCACGGAGGC AGGCGCCACC TATACTGCCC ACAAAGTGAT CATCGCTGTT CCCTTAGGCA TCCTGCAACA AGGCCATATC CACTTCTCTC CTGCCCTCCC CGATCAGATG GCAGCAGCCA ACAATATTGG CTGGGGTACG GTGATCAAAA CAGTCCTGGA ATTTAAGGAA CCCTTCTGGG AAAAACAGGC ACCACAAGTG GGCTTTGTAC TGGGAAAGGC GCCCATTCCT ACCTGGTGGA CGCAACTGCC GGATAAAGCC AATGTGCTTA CCGGCTGGCT GGGCGGACCA CCCGCTTTTC CGCATCTCCA CAAAACAGAC GACGAATTGC TGGAAATGGC GCTACAATCG CTGGCCATTC TTTGTAATGA AGACGCAGAT ACACTGAAAG CATTGCTGAC AGACAGCCAT ATCTCCAACT GGGCGAATGA TCCGCATGTA ACGGGTGCTT ACAGCTACAG TACACCGGCC ACAGCGGCGG CACAGGTATT ATTGAATACA CCGGTGGAAA GCACCCTCTA CTTTGCCGGA GAAGCCCTGT ATAAGGGCGC CAGTCCGGGT ACAGTAGAAG CAGCGCTCAG CACAGGTAAG GGGGTTGCAG AAAGGATCTT ACAGGGAATT AAGAATTAA
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Protein sequence | MRTSEEIIII GAGAAGLLAA RELSAHHSVT VLEARDMIGG RIQTVYRDGV KSAETGAEFV HGELPITLGL LKEAGLSYYH IYGKMFQVRD GKWDARYEMI EDWDGLLEKM SSIPTDTTMQ AFLDEQYPVE QYVSLHESVK SFVQGYDLAD MTRVSVKALY SEWTNESENN FRIDQGYTAM VRYLEDVCLR QQARIVTSAV VRHIEWSAGK VTVTTEAGAT YTAHKVIIAV PLGILQQGHI HFSPALPDQM AAANNIGWGT VIKTVLEFKE PFWEKQAPQV GFVLGKAPIP TWWTQLPDKA NVLTGWLGGP PAFPHLHKTD DELLEMALQS LAILCNEDAD TLKALLTDSH ISNWANDPHV TGAYSYSTPA TAAAQVLLNT PVESTLYFAG EALYKGASPG TVEAALSTGK GVAERILQGI KN
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