Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3268 |
Symbol | |
ID | 8359434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4024330 |
End bp | 4025223 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644965441 |
Product | PfkB domain protein |
Protein accession | YP_003122936 |
Protein GI | 256422283 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.266121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGATA TTTGTTGTGT AGGGCATATC ACATTGGATA AAGTAGTGAC CACGAAATCC GTGGTACATA TGGCAGGAGG CACTTCGTTT TACTTTTCCA ATGCTATCCG TCATATGGAC GTTAAATACA GACTGGTAAC CGCGCTGGCA GAGAGTGAAA TGAATAGTGT AAATGAGCTC AGAGCGAAAG GCATTGAAGT GGATGCATTG CCAAGTAAAC ACACCGTCTA TTTCGAGAAT ATCTATTCAG AAAACCAGGA TCACCGCACC CAGCGTGTAT TGCAGAAAGC AGATCCATTT ACCATCGAGG CACTGTCGCA TACGGAAGCA CGTATTTTCC ACCTCGGACC ATTACTGGCT GACGATTTTC CGGTAGAGCT GATCAAAGCA CTCTCCGCAA GAGGAAAGGT GTCACTGGAC GTACAGGGTT ACCTGCGTAA AGTGGAAGAC CATAACGTAC ACGCGATCGA CTGGCCGGCC AAACAGGAGG CATTGAAATA CATCCATACG CTGAAGGCCA ACGAGCACGA AATGGAAGTA CTGACCGGTC ATAAGGACGT ACGTAAAGGT GCGATGGTAC TGGCAGAGTG GGGCGTGAAA GAAGTGGTGA TCACACTGGG TAGTATGGGT TCCGTGATCT ATGCGGAGGG CGTATTCCAC CGTATCCCGG CTTACCTGCC GAACATGGTG ATCGATGCAA CAGGTTGTGG CGATACTTAT ATGGCAGGTT ACCTCTATCA GCGCAGCAAA GGTGCTACCC TGCAATATGC GGGTGAATTT GCCGCTGCAA TGGCGACTAT GAACATTGAG TCTTCCGGAC CATTCACCGG TAATAAACAG GACGTACTGG ACTTACTGGC TGCCAGCAGA GAGAAAATAT TTGCGGAACT GTAA
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Protein sequence | MYDICCVGHI TLDKVVTTKS VVHMAGGTSF YFSNAIRHMD VKYRLVTALA ESEMNSVNEL RAKGIEVDAL PSKHTVYFEN IYSENQDHRT QRVLQKADPF TIEALSHTEA RIFHLGPLLA DDFPVELIKA LSARGKVSLD VQGYLRKVED HNVHAIDWPA KQEALKYIHT LKANEHEMEV LTGHKDVRKG AMVLAEWGVK EVVITLGSMG SVIYAEGVFH RIPAYLPNMV IDATGCGDTY MAGYLYQRSK GATLQYAGEF AAAMATMNIE SSGPFTGNKQ DVLDLLAASR EKIFAEL
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