Gene Cpin_3268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3268 
Symbol 
ID8359434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4024330 
End bp4025223 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content49% 
IMG OID644965441 
ProductPfkB domain protein 
Protein accessionYP_003122936 
Protein GI256422283 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.266121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGATA TTTGTTGTGT AGGGCATATC ACATTGGATA AAGTAGTGAC CACGAAATCC 
GTGGTACATA TGGCAGGAGG CACTTCGTTT TACTTTTCCA ATGCTATCCG TCATATGGAC
GTTAAATACA GACTGGTAAC CGCGCTGGCA GAGAGTGAAA TGAATAGTGT AAATGAGCTC
AGAGCGAAAG GCATTGAAGT GGATGCATTG CCAAGTAAAC ACACCGTCTA TTTCGAGAAT
ATCTATTCAG AAAACCAGGA TCACCGCACC CAGCGTGTAT TGCAGAAAGC AGATCCATTT
ACCATCGAGG CACTGTCGCA TACGGAAGCA CGTATTTTCC ACCTCGGACC ATTACTGGCT
GACGATTTTC CGGTAGAGCT GATCAAAGCA CTCTCCGCAA GAGGAAAGGT GTCACTGGAC
GTACAGGGTT ACCTGCGTAA AGTGGAAGAC CATAACGTAC ACGCGATCGA CTGGCCGGCC
AAACAGGAGG CATTGAAATA CATCCATACG CTGAAGGCCA ACGAGCACGA AATGGAAGTA
CTGACCGGTC ATAAGGACGT ACGTAAAGGT GCGATGGTAC TGGCAGAGTG GGGCGTGAAA
GAAGTGGTGA TCACACTGGG TAGTATGGGT TCCGTGATCT ATGCGGAGGG CGTATTCCAC
CGTATCCCGG CTTACCTGCC GAACATGGTG ATCGATGCAA CAGGTTGTGG CGATACTTAT
ATGGCAGGTT ACCTCTATCA GCGCAGCAAA GGTGCTACCC TGCAATATGC GGGTGAATTT
GCCGCTGCAA TGGCGACTAT GAACATTGAG TCTTCCGGAC CATTCACCGG TAATAAACAG
GACGTACTGG ACTTACTGGC TGCCAGCAGA GAGAAAATAT TTGCGGAACT GTAA
 
Protein sequence
MYDICCVGHI TLDKVVTTKS VVHMAGGTSF YFSNAIRHMD VKYRLVTALA ESEMNSVNEL 
RAKGIEVDAL PSKHTVYFEN IYSENQDHRT QRVLQKADPF TIEALSHTEA RIFHLGPLLA
DDFPVELIKA LSARGKVSLD VQGYLRKVED HNVHAIDWPA KQEALKYIHT LKANEHEMEV
LTGHKDVRKG AMVLAEWGVK EVVITLGSMG SVIYAEGVFH RIPAYLPNMV IDATGCGDTY
MAGYLYQRSK GATLQYAGEF AAAMATMNIE SSGPFTGNKQ DVLDLLAASR EKIFAEL