Gene Cpin_3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3263 
Symbol 
ID8359429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4017994 
End bp4018506 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content45% 
IMG OID644965436 
Productouter membrane chaperone Skp (OmpH) 
Protein accessionYP_003122931 
Protein GI256422278 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGGA AATGTACACT TGCATTGGCG TTAGCTGTAT TCACGGTATT TATTTCATCA 
ACAGGATTTG CCCAAACGAA GATTGCCTAT ATTAATATGC AACAGTTGAT CACCGGTATG
CCGGAAGCAA AAAAAGCATT TGATACACTA CAGGTTTATC AGCAGGAACT GGCGAAAGAC
GGCCAGGAAC TGGTGACTGA ATTTCAGGCG AAAGTGTCCA AGTTCCAGGA GGCGGAGCCT
ACATTAAAAC CGGACATCAG AGAAACGAAA CTCAAAGAAC TGGAGATGAT GAAGGCCAAT
ATAGAACAGT ATAACGCACG TATGGAACAG CGCATGGCCG AAAGAGAACA ACAGCTGACA
GCACCGATCA TTGCAAAAGC GAAGAAGGCG GTATCAGACC TGGCTGCGGA GAAAGGATTT
GCCTGTGTAC TCGATAACTC AAAAGATATT GTTATAACGG CTACCTGTGA GGATCTGTTA
CCAGCAGCGA AACAGAAACT CGGTATTAAG TAG
 
Protein sequence
MLRKCTLALA LAVFTVFISS TGFAQTKIAY INMQQLITGM PEAKKAFDTL QVYQQELAKD 
GQELVTEFQA KVSKFQEAEP TLKPDIRETK LKELEMMKAN IEQYNARMEQ RMAEREQQLT
APIIAKAKKA VSDLAAEKGF ACVLDNSKDI VITATCEDLL PAAKQKLGIK