Gene Cpin_3154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3154 
Symbol 
ID8359319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3888256 
End bp3890397 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content40% 
IMG OID644965326 
Productserine/threonine protein kinase 
Protein accessionYP_003122822 
Protein GI256422169 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA CTGAGCCCAT AACACCTTCC ACTGAGGAAA ATACCGTGCA GCCGCAGGCC 
ACGCTATCGA ACAGTAAGGT GATAAACCAG CATTATCTCA TTACAAAGAT CTTAAGAGAT
ACGCCCAAAG GAAGTGTATT TAAATGCTTC TACCTCAAAG GCATTCTGAA AAGTGGTATG
TGTATTTTAA AATCAGGTAA ACGAGGCGCC AGTATGGACA ACTGGGGACG GGATATGAGA
GACAAACTGA AATGGCAGGA GGAGTTACAT AGAAAGTTAC AGTATCTCGT TCCCCTACCT
CGTTTGCTGG ATGCGTTTGA GTATAGGGAC GATTATTATA TAGCTATAAG TTATATTAAT
GGCCTATCAC TTTCAAAAAA AGTTCATGAA GTAGGAAGAG ATTTTCAAAA GCAGCTGCAA
ATGGGCAACA AAAAGGCTAT TGCAGTTTTA TCTTACCTCA TAAACATCAC TGAAATTTTG
AGCCGGCTTC ACCACAATGG GTATGTACAT CGCGATGTTA CTGTCGAAAA TTTCATAATA
ACCAAGTCCG GTAAAGTATA TATAATTGAT ATGGAACTGA CTTATTCTAT GAAAGATGCT
ATGCCTGATC CACCTCACAA ATTAGGAACC TATGGATATA TGTCACCTGA ACAGCTTATG
GGTACAAGAC CAACAGTGAA AGAAGACATT TTCGGCTTAG GAGCATTACT GTTCAAGGTA
TTGACCGGAA TAGACCCCAA TAAAGTAGTC GGCGGCCCTG CTGAGGAGTT ACAACACAAG
GCACAATTTT TCGTGACAGA TGCAATACTG GCCCAGTTAA TTGCATCGTG CTTAATGCCT
GATCCAAAAT ATAGGCCGGA AATAAGGGAG ATCAAAAACG TTTTGGAAAT GTATAGATTA
GATATAACTC GGGGTAGAAA GCGGCCTATC TTGTCTCCTG GTGATAACCT TACAGAAGAA
AGCTATATAA CAACGATAAT TCAACGCACT ATTAATTGCA TGGCATCGCC ATTAATGGTA
AAAGAAGAAC TATGGTTTTC TGAGCGCATG GACATGGAAG CCAGTCAGGA AGCAACATTA
AACATTGCCC ATTACCCTTG CTTCAGCCGG GGAGTAATGG GTGTTTTTTA CCTCCTGGGA
ATATGCAAAC GTGCCGGATA TGACATCAGT AATCACAATT CCATAATTGA CAACAGTATT
GATTTTGTTG TCAATATCCT CCAAAATAGT TTCAACGATT TGCCACCCGG ACTTCATTTC
GGAAGGGCAG GCATTGCAGC AACAATAACT CTGGGAATGG ATATGCAGCT GCTTAAACCA
GAATTTGATC ATAAGAAATG GATCATCAAA TTGTTAAAGG ATGATCCGGA AGAGTTAGGC
TTTATGAATG GCATAGCTGG TATTGGCATG GCAGTATTAA TGTGTTCGGC TTATTTGCCT
TCAGAGGATG TTGAACGAAA ACTATTTCAG TATGTTAATC ATATAATAGA GGGTCAGAGA
AAAAGTGGAA GTTGGCAGCG CATAAACAGC AGAGGTAAGC CAGAAGTAAA TATAGGCTTT
GCGCATGGAA GCAGTGGAAT TATCTGGTTC CTTTTTGACT ATTATGAGCA GTTTGGCAAC
TCCGATGTAT TAAAAGCCGC AGAAACTGGA TTAAAATACA TCATAAGGAG ATCTAAAAAA
CGAAATAACG GAAGAATTGA CTGGAAAAGC GATAAAGAAA ATGAAATGGA TTACTGGTGG
TGTGAAGGAG CGCCCGGTAT AGCCATGGCA TTTCTGAAGG CTTACAAGGT TACTAAAAAG
CAGGTGTATA AAATGTACGC CACGATGGCA TTGAATACAC ATGAATCTCA TATCGTTAAT
AACAACCTTA CGCAATGCCA TGGCCTGGCT GGCCTGGGTG AAATTTATTT AGAAGCATAT
GCCATTTTGA ATGAGCCAGA ATGGCGCGAA CGGGCGCTGT GGATTGTGAA AGCATTGATA
GAGTTAAAAA AGGAACATCC AATATATGGT TCTTACTGGC TGCTTCAGAA AAAATTATAT
CCGGTAGCTG ACTTCATGAT AGGAAACGCA GGAATTATTC ATTTCCTGGT TAGGTATTTA
AAGCCTCGTG AAATATCATT CCCATTATTA CGATCATGTT AA
 
Protein sequence
MKTTEPITPS TEENTVQPQA TLSNSKVINQ HYLITKILRD TPKGSVFKCF YLKGILKSGM 
CILKSGKRGA SMDNWGRDMR DKLKWQEELH RKLQYLVPLP RLLDAFEYRD DYYIAISYIN
GLSLSKKVHE VGRDFQKQLQ MGNKKAIAVL SYLINITEIL SRLHHNGYVH RDVTVENFII
TKSGKVYIID MELTYSMKDA MPDPPHKLGT YGYMSPEQLM GTRPTVKEDI FGLGALLFKV
LTGIDPNKVV GGPAEELQHK AQFFVTDAIL AQLIASCLMP DPKYRPEIRE IKNVLEMYRL
DITRGRKRPI LSPGDNLTEE SYITTIIQRT INCMASPLMV KEELWFSERM DMEASQEATL
NIAHYPCFSR GVMGVFYLLG ICKRAGYDIS NHNSIIDNSI DFVVNILQNS FNDLPPGLHF
GRAGIAATIT LGMDMQLLKP EFDHKKWIIK LLKDDPEELG FMNGIAGIGM AVLMCSAYLP
SEDVERKLFQ YVNHIIEGQR KSGSWQRINS RGKPEVNIGF AHGSSGIIWF LFDYYEQFGN
SDVLKAAETG LKYIIRRSKK RNNGRIDWKS DKENEMDYWW CEGAPGIAMA FLKAYKVTKK
QVYKMYATMA LNTHESHIVN NNLTQCHGLA GLGEIYLEAY AILNEPEWRE RALWIVKALI
ELKKEHPIYG SYWLLQKKLY PVADFMIGNA GIIHFLVRYL KPREISFPLL RSC