| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3148 |
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| Symbol | |
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| ID | 8359313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3880078 |
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| End bp | 3883437 |
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| Gene Length | 3360 bp |
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| Protein Length | 1119 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644965320 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003122816 |
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| Protein GI | 256422163 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCAGA AAGCACTACT AATGGTGTTC GGCTTATTCC TGTTTTTCTA TATGTCAGGT
TGGGGACAAA AGAAAACCAG ACAGGAGCGA ATAACAATTT CAGGAACGCA CACTCTAAGA
AAAGTTTTTG ACATTATCTA TGACCAGTCA GGCATTCAAA TCACCTATAA TAACCAGGTA
TTAAATGATC GCGAAAAGGT TAGTTTAGAA ATAACAAATA GTACCATCGA CGATGTGCTA
CAACAAGTAT TAAAAGGGAA AAATATTGTT TGGGTAAGAG AGGAAAAGTT TATATCTATT
AAATCCTCTG TTCAAAAAAA CAATAGTCAA GCCAATAGGA CAGATGCAGG CTTTAATATA
TCAGGCATAG TTCAGTCTCC TGACGGAAAA AACTTAGCTG GTGCAACAGT AATGATAAAA
GGTACTGGAA ACGGCACTGC ATCTGACAAT ATGGGTAGGT TTTCTTTAAA CAATGTAGCT
CCCAATTCTA AGTTAACAAT TTCTTATACA GGATACATTT CGCAGGAGAT TGTTATATTA
AATACATCGG ATTTGACAAT AGTTATGCAC CCTGCAGATA ATTCACTTGA AGAAACGGTT
GTAGTTGCAT ATGGTACTAC CACAAAAAGA GGTAATACAA GTGCTGTTAC TGTTGTAAAG
GGTGAAACCA TAGCTAACCT GCCTAACAGA TCAATTGATC GTAGTCTTCA GGGGCAGGTT
CCAGGCTTAC TAATAACTGC TGGAAGCGGA GCACCAGGAG GCGGAACAAG TAATTTTGTG
TTACGAGGCG TTGGCACTGG TGCCGACCTG AGATTAATGG GAGGAATTGT TAGACAACCA
CTTATAGTAA TTGATGGAGT ACCAACATCT TCAGTTAATA CTGTCCAATA TCAAACCGGA
TCGAATCAGG CATCCTATAC TAATCCGCTT GCACAGTTCA ATCCAGATGA TATTGAAGCT
ATATCCATTC TGAAAGATGC CGCCGCCATA GCCCTATATG GATCCAAAGC CAGTAACGGC
GTGGTCTTAA TATCAACCAA GAAAGGGAAA ATTGGCAAAT CTTCGTTCGC TTTACATCAT
CAAACTGATA TTGCCAACCC ACTCACCTAT TCAGATAAGA TGTTGAATCA AGATGAATAT
TTAGCCTTAT TAAAAGAAGC TTACGTTGCT TCTAATCCAT CCCAATGGAC TGATGCTGCT
ATTGAAGCAG ACTTAAAAAC CAAATTTCCT ACGTATGTAA ACGAATCAGG TGATAAAGTA
TTTTATAGTC AACCTGACTG GTTTGATGCT ATTTATAGGA AAAGTGCAAT TACTGTAACC
AACGAAATAT CTAACTCCGG CGGTGGCGAG AAGAATCAAT ATTATTTCAG TTTGGGTCAT
ACTACCCAAA AGGGCACAGT TAAACACACA GGCTTTGACA GAATTGCGGT TCGTTATAAT
TTTGCTAACC AACCTGTCAA ATGGTTAAAC TTTGGGCTTA ATTCTACGAT AACTTATACA
AGTCAGAACT ATCTTAAAAG CGGATCGGAA GAGCAGTCAA ATTCAGGAAA TGGTTTCGCC
TACACTATAT CACCCTTAAA TCCGGTTAGA CTACAAAACA ATCAATATAA CCTATATCCC
TTCGTAAGTA GTGGTCTCAC GTACAACAAT CCGGTCGCCG AATTAGATTA TAATATTAAC
AGAACCCAGT CTTACAGAGG ATTAGCAAAT TTTTATGCGC AGGCAAATAT TACAAGAAAT
GTTACAATAC GAACACTTTT AGGGGCTGAC ATATTGTTTG CACAGGTCAA AGAAAAGATT
GATCCTAGAT TATCCGTTAG CTTCAATCCA CCAGGTGTTG GCCTGATTAA CCAATCTGAT
CCCTTTTCCT CCAGGATTAT TAACACAAAT ACTTTTCAAT ATAGTAATAC CTTTAACAAT
TCAAATACAG TAGAATTACT GTTTGGACAA GAAGCTCAAA TTGAGAAAAG CGCATTCTTC
AATGGTTCAA AACAAGGCCT TTCTGTACCA TATTTAACCG ACCTTTCGGC TGCATCTACT
ATCTCTGATT TAAATGGAAG TGAGAGCAAA TCGACTCTTT TGTCTTATTT CGCTCAGGGA
AATTATAACT ACATGGCTAA GTATTACTTT TCGACCAGTT TTCGCCGTGA CGGTTCATCT
AAGTTTGGAA CTAAAAATCA GTATGGCAAT TATTGGTCAA TTGGAATGGG CTGGGTACTT
TCAGAAGAGA AATTCCTCAA AACTGATTGG GTAAACTTTC TAAAGCTAAG AGGAAGCGTT
GGTACTTCAG GCAACTCTGC ATCCCTCAGT TCAACCGTTA GATACGACTT GGTAAGTCCA
AGCGCTTTAT ATAATAACAC TGCCGCTGCG ACAATTACCC CAGGAAATCC CGAAGTAGAA
TGGGAAAAGA CTTTTAATCA TGACATTGGT CTTGAATTCA CGCTATTCGG GAAAGCTTTA
TCGGGAACAG TGGATTGGTA TTACAGGCGC ATTTCTGATT TGCTGTATAG CTTTATGCTA
CCAGGTACAT CCGGTGCTAC ATCTGTTATG CAAAATATTG GTGAAATGGA GAATAAAGGT
TGGGAAATAG CTCTACAAGC GAACTTAGTC AAATCGCCAA ACTTTAATTG GAACCTTCAG
GCCAACTGGA GCACTAATAA AAACAAACTC ATAAAAGCCA GTTCTCCTTT ATCAGTTACA
CAGTTCGTCG CGGATAAAGA AGGAGAGAAT TTTAATTCAT ACTATTTAGT TAAATGGGCA
GGTGTAGATC CCACTGACGG AAAGCCACAG TGGTATGATT TAGAAGGCAA AATCACAAAG
ACGTATGCAA TTGCAAATAA GCAAATTGTA GGCAAACCCC AGCCAGACGG TTTCGGAGGA
GTAACAAACA ACTTCAATTA TAAAAACTGG GATTTATCAT TTTTATTCTA TTACCAATAT
GGATACCAGA TTTATGATTT TGCTAAAAGC TCATTACTTA ATGACGGAGG AACTGCGAGC
AATGCTTATT CCAATCAAAT ACGGGAGGCA TTAGATAGAT GGCAGAAACC GGGAGATAAA
TCACCAAATC CAAGAAGAAT ATTAAACAAC ACCGATGGAG GAAGCTCAAA TGCGTCAACA
CGTTTTCTGT CAGACGGTGA CTACATAAGG CTTAAAAATA TTTCATTAGG ATACCAACTC
CCTGCTCATA CACTGCATAA GATAAAGCTC AGTAATCTTC GCGTCTATTT GCAAGGGAAC
AATCTCTTTC TAATTACGAA GTTCAATGGA TTTGATCCTG AAAATGTAGG CGTAGGATAC
GCTCAAACTC CCTATCCTCA ATCAAGATCT TTTTCCATTG GTTTAGATGC TAAATTTTAA
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| Protein sequence | MFQKALLMVF GLFLFFYMSG WGQKKTRQER ITISGTHTLR KVFDIIYDQS GIQITYNNQV
LNDREKVSLE ITNSTIDDVL QQVLKGKNIV WVREEKFISI KSSVQKNNSQ ANRTDAGFNI
SGIVQSPDGK NLAGATVMIK GTGNGTASDN MGRFSLNNVA PNSKLTISYT GYISQEIVIL
NTSDLTIVMH PADNSLEETV VVAYGTTTKR GNTSAVTVVK GETIANLPNR SIDRSLQGQV
PGLLITAGSG APGGGTSNFV LRGVGTGADL RLMGGIVRQP LIVIDGVPTS SVNTVQYQTG
SNQASYTNPL AQFNPDDIEA ISILKDAAAI ALYGSKASNG VVLISTKKGK IGKSSFALHH
QTDIANPLTY SDKMLNQDEY LALLKEAYVA SNPSQWTDAA IEADLKTKFP TYVNESGDKV
FYSQPDWFDA IYRKSAITVT NEISNSGGGE KNQYYFSLGH TTQKGTVKHT GFDRIAVRYN
FANQPVKWLN FGLNSTITYT SQNYLKSGSE EQSNSGNGFA YTISPLNPVR LQNNQYNLYP
FVSSGLTYNN PVAELDYNIN RTQSYRGLAN FYAQANITRN VTIRTLLGAD ILFAQVKEKI
DPRLSVSFNP PGVGLINQSD PFSSRIINTN TFQYSNTFNN SNTVELLFGQ EAQIEKSAFF
NGSKQGLSVP YLTDLSAAST ISDLNGSESK STLLSYFAQG NYNYMAKYYF STSFRRDGSS
KFGTKNQYGN YWSIGMGWVL SEEKFLKTDW VNFLKLRGSV GTSGNSASLS STVRYDLVSP
SALYNNTAAA TITPGNPEVE WEKTFNHDIG LEFTLFGKAL SGTVDWYYRR ISDLLYSFML
PGTSGATSVM QNIGEMENKG WEIALQANLV KSPNFNWNLQ ANWSTNKNKL IKASSPLSVT
QFVADKEGEN FNSYYLVKWA GVDPTDGKPQ WYDLEGKITK TYAIANKQIV GKPQPDGFGG
VTNNFNYKNW DLSFLFYYQY GYQIYDFAKS SLLNDGGTAS NAYSNQIREA LDRWQKPGDK
SPNPRRILNN TDGGSSNAST RFLSDGDYIR LKNISLGYQL PAHTLHKIKL SNLRVYLQGN
NLFLITKFNG FDPENVGVGY AQTPYPQSRS FSIGLDAKF
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