| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3123 |
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| Symbol | |
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| ID | 8359288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3842071 |
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| End bp | 3845490 |
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| Gene Length | 3420 bp |
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| Protein Length | 1139 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965296 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003122792 |
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| Protein GI | 256422139 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0154313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.66529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAA CAGCGCATAC ACGGGGCTCG TGTATCCAAT TCTTATTATT TCTCATGCGA
TGTTCGGTTT ATATATTGAT ATTTGCCTTT ACCTTTTCAT TTTCTCTGTT CGCCAATAAT
ACCGACGGAC AGGATATCAG AGAAGTAAAG ATCAACCTGA CTGTCAGCAA TATGAAGCTG
TCAGCCGTTC TGGAAAGGAT CCAGCAGATG ACGCCTTTCC GTTTTGTTTA CAATTCCTCC
CACATCAAGG CGACTGCACC CGTAAGTATG CATGTCAGCA ATATGCCGGT GGACAAAGTC
CTGGCACAAC TGCTCAATAC CTCTGATTTT AGTTTCGAAC AGAATAAAAC ACAGATCATT
ATTACCCGGA ATACCCGGAG CGTGATGGCT GATATGGCGC TGGAAGGCGA TATGTTGTCA
CTGCCGGTGG ATACCGCTAT CACTGTAAAA GGTAAGGTAA AAGATGATAA AGGCCAGCCG
CTGATCGGTG TTACCGTAGG CGTAAAAGGC AAAAACAGGG GTGTAACTAC TGACGCTACT
GGTAGCTTCT CTATCAGGGT TGAAAACAAT GACTCGCTGG TATTCAAGAC TATCGGATTC
TCTCCGGTGA CTGTCAGCGC GCTCTCCAAC CTGAATAATA TTACCCTGTC CACCAGTACT
ACCAGTCTGA ATGACGTAGT AGTAGTGGGT TATGGTGTAC AGACAAGACG CGACCTGACC
GGTACTATCT CCACCGTAAA AGGCGCAGAT ATCAAAAACC TGCCGGTGAG TGATGCCGCA
CAGGCCATTC AGGGCCGCGT AGCTGGTGTC GATATCGTTC GTTCGGATGG ATCTCCTGGT
ACGACGCCAA GTATCCGTAT CCGTGGTACA GGTACTATCA ATAACTCAGA ACCGTTGATC
GTGATCGATG GTGTGCCTGC TGCCTCTTCC GGCCTGAGTG ATATCAATAA TAATGATATC
GCTTCCATGG AAGTACTGAA AGACGCTTCT TCTTCTGCTA TCTATGGTAC CCGCGCTGCT
AACGGTGTAA TCATCATTAC CACTAAGAAA GGTACTTACA ACGAAAAGCT GAATACCTCC
GTAAACATCT ATCGTGGTGT ATCTAACGTG CGTAAATATC TGCCGCTGTT AACTGCGCCT
GATCTCGTAA AACTGAAACA GGAACGTTAT ACCAATGATG GTTTGTCCGT ACCAGCTATC
TGGCAGGATC CATATTATGC GGTACAGCGT AGCGACTGGC AGAAAGCATT ATTCAATACC
GGTCACGTGA CCAATGCGGA TGTGTCTATC AAAGGCGGTA GTGCATTTTC CAACTACCTG
TTCTCACTGG GCTACTATGA TGAAAAAGGA TTGATCACCA ATACCTATTT CAAACGTTTC
ACCGTACGTA TCAATTCCGA ACACAGGATC AACAGCCGCC TGAAAGTAGG GGAGAACTTA
CAACTGACCG CCCGTAAGGG TAATTCACTG GATACCTATT CCTCACAGAC GGGTCTTATC
TTCAGCGCCC TGCGTTTCAA CCCTGCTATT CCTGTGAAGG ATGAAACAGG TAACTACGGA
TCCGCTCAGG GCAGCAATGA ACTGGGTGAC ATCAACAACC CGGTATATAC CGCTGAAACA
ACAGATGCGT GGATTAAGAA CTATCGTATC CTGGCAAATG CTTTTGCAGA AGTAGAGATC
ATCAGAGACC TGAAACTGCG GCTGAACTAC GCATTTGACG GAACGCTGAG CAACTCTTTC
AGCTTCCTGC CTAAGACACT GACACAGGTA CGTACCCGTG ACGATGCAGA ATTAAACCAG
GCGAATACAA GTACCAATCA ACACCTGGGA GAAGCTTTCC TGAGTTATAA TAAGACCCTT
GCACAGAAAC ATCAGATATC CTTAACAGGC GGTGTTTCCT ACCAGAAATA TACAGGTAGC
TATTTCAACG CACAGCGTAA TGGCTTTGAT GATGAATCTC CTTATGTACT GGTGCTGGAC
AATGGTTCCA TCGTATACAA TGCCGCTGGT AACTATTATG CTACCAACAT CCTGGCATCC
GGATTTGTAA GAGGTTTCTA TAGCTTTAAA GGCAAATACC TGCTGACCGC TACTATGCGT
GCAGATGGTT CTTCCAGATT TGCACCGGGT AACCGCTGGG GCTATTTCCC TGCTGTATCT
GCAGGATGGC GTGTTTCTGA TGAAGCCTTC TTCAGGAATA ACGTACATGC TGTCAGCAAT
CTGAAACTGA CAGGTGGATG GGGCGTACTG GGTAACCAGA ACGTGACCGA ATTCCAGTAC
TTAGCTACCG TGGTTAAAAA CCGTAAGTAT AACTTCGGTG ATGTGCCTTA TACCGGGATC
TGGAATTCCA GTCTTGCGAA CAACGCTATT ACCTGGGAAA AAGCACACAT GACCAACATC
AGCATGGAGA TCGGATTCCT GAACAACGCG CTGAATGGTA CCATCACTTA CTTTGACAAG
AATACCATCG ACATGCTGGT ACCTGCTGCA AAGCCGGACC TGCACGGTAC ATCTACAGTG
CCTGATGAGA ATATGGGCAG ACTGAACAAC CACGGTTGGG AGTTTGAAGT GTCCTATCAG
GGTGGTAAAA AAGCGTTTAC TTATTTCCTA GCCGCTAACG CCACTGTACT GAAGAATAAA
GTGACCAGAT TGTATTCCAG CAATTCTTAT ATCGGTTCGT CTAACTACGG TCGCCAGAAC
CAGGAAATCT CCCGTACCTA CGAAGGACAG CCAATCGCTT CTTTCTACGG ATGGAAAACA
GCTGGTCTGT ATCAGAACCA GGCACAGATA GACAACGATC CTTATATCGC TAAAGATGGC
AGGAAAGCGA ATATCAAACC AGGTGACGTA CGTTTCGTAG ACGTTAATAA TGACGGTGCA
ATCACGGAAG CCGACCGTGT GTATCTGGGT GATCCTAACC CACGTCTGCA ATACGGTTTC
CAGGCAGGTG GTAACTTCAA AGGCTTTGAC CTGAACCTCT CCTTTACCGG TGTAGCAGGT
GTAAAACTGT ATAACGCAGA TAAAATGCAG GGCCTGGATC CCACCTATTC ATACAATTAC
TATGCAGAAC AGCTGAACCG CTGGCATGGT GAGGGTACCA GCAACAGCGT ATCCCGTATG
ACCCTGAGCG ATAACAATGG TAACTACCGT ACGTCAGACA GGTTCATTGA AAAAGGTAAC
TATTTCGCCC TGCGCAACGT TTCACTCGGA TATACCATTC CTGCGAAAGT ATGGGGTGGC
CAGTCCAATG CGCCTGGTAT CCGTGTGTAT GTAGCCGGAC AGAATATGTT CATCATCACC
AACTACTCCG GTCTGAATCC TGAACTGGGT TATACAGACG GTAATAAACA AAGAGGTGTG
GACGTAGCCA CCTATCCACA GGCAAGAAGT ATAACATTTG GTGCTTCAAT GAATTTCTAA
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| Protein sequence | MEKTAHTRGS CIQFLLFLMR CSVYILIFAF TFSFSLFANN TDGQDIREVK INLTVSNMKL
SAVLERIQQM TPFRFVYNSS HIKATAPVSM HVSNMPVDKV LAQLLNTSDF SFEQNKTQII
ITRNTRSVMA DMALEGDMLS LPVDTAITVK GKVKDDKGQP LIGVTVGVKG KNRGVTTDAT
GSFSIRVENN DSLVFKTIGF SPVTVSALSN LNNITLSTST TSLNDVVVVG YGVQTRRDLT
GTISTVKGAD IKNLPVSDAA QAIQGRVAGV DIVRSDGSPG TTPSIRIRGT GTINNSEPLI
VIDGVPAASS GLSDINNNDI ASMEVLKDAS SSAIYGTRAA NGVIIITTKK GTYNEKLNTS
VNIYRGVSNV RKYLPLLTAP DLVKLKQERY TNDGLSVPAI WQDPYYAVQR SDWQKALFNT
GHVTNADVSI KGGSAFSNYL FSLGYYDEKG LITNTYFKRF TVRINSEHRI NSRLKVGENL
QLTARKGNSL DTYSSQTGLI FSALRFNPAI PVKDETGNYG SAQGSNELGD INNPVYTAET
TDAWIKNYRI LANAFAEVEI IRDLKLRLNY AFDGTLSNSF SFLPKTLTQV RTRDDAELNQ
ANTSTNQHLG EAFLSYNKTL AQKHQISLTG GVSYQKYTGS YFNAQRNGFD DESPYVLVLD
NGSIVYNAAG NYYATNILAS GFVRGFYSFK GKYLLTATMR ADGSSRFAPG NRWGYFPAVS
AGWRVSDEAF FRNNVHAVSN LKLTGGWGVL GNQNVTEFQY LATVVKNRKY NFGDVPYTGI
WNSSLANNAI TWEKAHMTNI SMEIGFLNNA LNGTITYFDK NTIDMLVPAA KPDLHGTSTV
PDENMGRLNN HGWEFEVSYQ GGKKAFTYFL AANATVLKNK VTRLYSSNSY IGSSNYGRQN
QEISRTYEGQ PIASFYGWKT AGLYQNQAQI DNDPYIAKDG RKANIKPGDV RFVDVNNDGA
ITEADRVYLG DPNPRLQYGF QAGGNFKGFD LNLSFTGVAG VKLYNADKMQ GLDPTYSYNY
YAEQLNRWHG EGTSNSVSRM TLSDNNGNYR TSDRFIEKGN YFALRNVSLG YTIPAKVWGG
QSNAPGIRVY VAGQNMFIIT NYSGLNPELG YTDGNKQRGV DVATYPQARS ITFGASMNF
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