| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3108 |
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| Symbol | |
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| ID | 8359273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3828720 |
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| End bp | 3831260 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965282 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_003122778 |
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| Protein GI | 256422125 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.895744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.131946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA TCGATAATAC ACAACCGGCA GACGAATCAT TACAGAATAT CCTCCACCTG
GGGGATATGT ATGAGAATTG GTTCCTTGAT TACGCGTCCT ACGTGATCCT GGAGCGTGCG
GTACCCAGCG TGGAAGATGG TTTAAAGCCT GTTCAACGCC GTATCCTGCA TGCGATGAAG
GAAATGGACG ATGGCCGTTT TAATAAAGTG GCCAATGTGA TAGGGTCCAC CATGCAGTTC
CACCCGCATG GGGATGCTTC TATCGGTGAT GCGATTGTTA ACCTCGGACA AAAAGACCTG
CTGATAGATA CCCAGGGTAA CTGGGGGGAT GTACGTACCG GTGATGATGC AGCAGCAGCC
CGTTATATTG AGGCCCGCCT GTCTAAGTTC GCGCTGGAAG TAGGCTTTAA CAGCAAAACT
ACCCAATGGC AGCTGAGCTA TGACGGTCGT AAGAATGAAC CCTTGGCACT GCCTATGAAG
TTCCCTTTGC TGCTGGCACA GGGTGCGGAA GGTATTGCGG TTGGTTTGTC TACCAAAATA
TTACCACACA ACTTCATAGA ACTGCTGGAA GCGTCTATCA AATACCTGAA AGGAAAGAAA
TTTGAGATCT TCCCGGATTT CCCTACCGGC GGTATGATAG ACGTGGCTAA CTACAACGAT
GGTCGTCGTG GTGGTAAAGT ACGTGTACGT GCACATATCG AAGAGAAAGA TAAAAAGACG
CTGCTGATCA AAGACGTACC GTATGGCGTT ACGACTACCG CTCTTATGGA GTCTATCGTA
AAAGCCAATG ATAACGGTAA GATCAAGATC AAGAAAGTAG TAGATAATAC CGCGAAAGAT
GTAGAGATTG AAGTGCAGCT GGCGCCTGGT ATTTCTCCTG ATATTACGAT CGATGCGCTG
TATGCGTTCA CAGATTGTGA GATATCCATT TCACCCAATG CCTGCGTGAT CATCGACGAT
AAGCCACGTT TCCTGACGGT AAGCGAACTG CTGAGATCTT CTGCAGATTT CACACAGGCT
TTACTGAAAC GCGAACTGGA GATCAGACTC AGCGAATTGC AGGACAAATG GCACTATACT
TCCCTGGAAA AGATCTTCTT CGAAAAAGGA ATCTATAAGG AACTGGAGCA GAAACACAAA
GACTGGGAAG CAGTGATTGC GGCTATCGAC AAAGGTTTCG CTCCTTACAA GAAGAACCTG
AAAAGAGAGA TTACCCGTGA AGATATCCTG AAACTGACGG AGAAACCGGT ACGCCGTATC
TACAGACTCG ATATCAACGA ACTGAATGAG CAGATCAAAT CCATAGAAGC GGATATCAAA
GATGTGAAGC ATGACCTGGC CAATATGGTT GACTTCACTG TCGCTTACTA TGAGAACCTG
CTCAAGAAAT ATGGCAAAGG CCGCGAACGT ATTACCGAGA TCAAAACATT CGATACGATC
CAGGTACAGC AGGTTGCGAT TGCCAATGCG AAGATCTATG TGAACAGAGT AGATGGTTTC
ATCGGTACTT CCCTGAAGAA AGATGAATTC GTTGCCGACT GTTCTGACCT CGATAACATC
ATCGTCTTCA AAAAAGACGG TAAGATGATC ATTACCAAAG TAGCTGATAA AGTCTTCGTA
GGTAAGGATA TCATTCACGT AGATGTATTC AGAAAGAATG ACGAACGTAC TACCTACAAC
ATGATTTACG TGGATGGCAA GACCGGTATG AGTTACGCCA AACGCTTCAA TGTAACAGGT
ATTACCCGTG ATAAGGAATA TGATCTGACA GTGAAAGGAG AGAAGAATTC AAAAGTGCAT
TATTTCTCTG CTAATCCGAA CGGAGAGGCA GAAGTGGTAA GCATCCGTCT GAGCCCTAAC
TGTGCAGCGC GTAACAAGGA ATTTGACCTG TATTTTGAAA CCATTGCCAT CAAGGGACGT
AACTCCCAAG GTAACCAGGT GACGAAATAC CCGATCCGCA ACGTGAAATT TAAAGAGAAA
GGCGCCTCTA CACTGGCGGG CCAGAAGATC TGGTACGATG CAGAGATCGG ACGTCTCAAT
ATGGAAGAAC GTGGTGTTTA TATCGGTTCC TTCGACGGAG AAGACAAGAT CTTTGTAGCC
TTTAAAAATG GTACTTACGA GCTGACAAAC TTCGAACTGA CTAACCGTTA TGATCCGAAT
GAGCTTGTTT ATATCGAGAA ATTCAATCCT GAGAAGGTCG TATCCGCTAT CTACTTTGAT
GCAGACAAGA AACAGTTCAA TGCAAAACGT TTCAAGATCG AAACGCAGAC CATGAACAAC
AAGTTCCTCT TCATCAAAGA AGGCGCAGGT AACTATCTGG AAATGATCAC CACTCACTCC
GAGCCGGTTA TCCTGCTGAA AACAGGTAAG AAACGTAACC CGGATGAAGA GGAAATCAAC
CTGGCTGAAT TCGTGGAAGT AACCAACTAC AGAACCGTAG GTACACGTAT CTCCGGAGAA
GAGTTGATCA GTGCCGAACT GGCCTCTGAC GAAGAGGAAC CAGATGAAGG AGGTGTACAG
GGACAGGGAG AATTGTTCTG A
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| Protein sequence | MSDIDNTQPA DESLQNILHL GDMYENWFLD YASYVILERA VPSVEDGLKP VQRRILHAMK
EMDDGRFNKV ANVIGSTMQF HPHGDASIGD AIVNLGQKDL LIDTQGNWGD VRTGDDAAAA
RYIEARLSKF ALEVGFNSKT TQWQLSYDGR KNEPLALPMK FPLLLAQGAE GIAVGLSTKI
LPHNFIELLE ASIKYLKGKK FEIFPDFPTG GMIDVANYND GRRGGKVRVR AHIEEKDKKT
LLIKDVPYGV TTTALMESIV KANDNGKIKI KKVVDNTAKD VEIEVQLAPG ISPDITIDAL
YAFTDCEISI SPNACVIIDD KPRFLTVSEL LRSSADFTQA LLKRELEIRL SELQDKWHYT
SLEKIFFEKG IYKELEQKHK DWEAVIAAID KGFAPYKKNL KREITREDIL KLTEKPVRRI
YRLDINELNE QIKSIEADIK DVKHDLANMV DFTVAYYENL LKKYGKGRER ITEIKTFDTI
QVQQVAIANA KIYVNRVDGF IGTSLKKDEF VADCSDLDNI IVFKKDGKMI ITKVADKVFV
GKDIIHVDVF RKNDERTTYN MIYVDGKTGM SYAKRFNVTG ITRDKEYDLT VKGEKNSKVH
YFSANPNGEA EVVSIRLSPN CAARNKEFDL YFETIAIKGR NSQGNQVTKY PIRNVKFKEK
GASTLAGQKI WYDAEIGRLN MEERGVYIGS FDGEDKIFVA FKNGTYELTN FELTNRYDPN
ELVYIEKFNP EKVVSAIYFD ADKKQFNAKR FKIETQTMNN KFLFIKEGAG NYLEMITTHS
EPVILLKTGK KRNPDEEEIN LAEFVEVTNY RTVGTRISGE ELISAELASD EEEPDEGGVQ
GQGELF
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