| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3094 |
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| Symbol | |
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| ID | 8359259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3811277 |
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| End bp | 3813217 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965268 |
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| Product | 1,4-alpha-glucan branching enzyme |
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| Protein accession | YP_003122764 |
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| Protein GI | 256422111 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.302104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0711873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTAA ATAAAAAGTC GAAGTTACAG CCGGTAGTAC CCTTTTCCCT GCTTTCCGCC
AGGGATGTAG AACTGTTTCA GGAAGGAACT CACGCGCACC TGTATGAGAA ATTCGGGGCG
CATACATTGG AATATGAAGG CGTAAAAGGA ACTTATTTCG CTGTCTGGGC GCCTAATGCT
GCATATGTAT CCGTTATCGG AGATTTCAAC GAATGGGATC ATTATAGTCA CACTTTGTAC
CCGAGATGGG ACAAGTCCGG CATATGGGAA GGCTTCATCC CACAGGTAAA AAAAGGCGCG
CTCTATAAAT ATTTTATCCG ATCCAATTCC GGGGAAGAAC TGCGAAAAGG AGATCCTTAC
GCTAACTATT GGGAACAGCG TCCGTTGACG GCTTCTGTAA CCTGGCAGCT GGATTATAAA
TGGAAAGACA AGCGCTGGAT GGAACAGCGT CATAAACATA ATAGCCTGGA AAGTCCTTTC
AGTGTATATG AAGTACACCT GGGCTCCTGG CGCCGGCCTG ATAAATCTAA TCACGAATTA
TTCTATACAT ACGCGGAAAT AGCCGCCATG CTGGTACCTT ACGTAAAGGA TATGGGTTTC
ACCCATGTGG AACTGATGCC GGTCATGGAG CATCCTTTTG ATGGTTCCTG GGGATACCAG
GGTACCGGTT ATTATGCACC TACTTCAAGA TACGGTTCTC CGCAGGATTT CATGGCTTTT
GTCGACGCAT TTCATCATGC AGGTATAGGT GTCATCCTGG ACTGGGTGCC TTCTCATTTC
CCTTATGACG CCCATGGATT GTACAGATTC GATGGCGCGC ATACTTACGA GTATGCCGAC
ATGCGTAAGG GCTATCATCC TGACTGGAAC AGCTATATTT TCAACTATGC CCGTAGCGAG
GTACGTTCAT TCCTGCTCAG TAATGCCGTA TTCTGGCTGG AGAAATACCA TATAGACGGG
CTGCGGGTGG ATGCCGTCGC CTCCATGATT CACCTGAATT ACTCCCGTGA GGCAGGGGCA
TGGGAGCCCA ATGAACTGGG AGGAGAGGAG AACCTGGAAG CAGTGTCGTT CCTGAAACAT
ATGAATGAGA CGATCTACAA ATTGTTTCCG GATGTGCAGA CGATCGCAGA GGAATCTACC
AACTTCTATG GCGTATCCCG ACCTGTTTAT ATGGGTGGAC TTGGATTTGG TATGAAATGG
ATGATGGGCT GGATGAATGA TACCCTGGCT TATTTTAAGC GCGATCCTTA TCACCGTAAA
TGGCACCAGG ATCAGCTGAC CTTCAGTATT GCCTATGCAT TTACGGAGAA TTTCATGCTG
CCGCTCAGCC ATGATGAAGT GGTACACGGT AAATCGCCTA TGATGTATAA AATGCCGGGC
GATGACTGGC AGAAGCTGGC CAACTTACGC CTGATGTACA GTTATATGTT TACCCATCCT
GGTACTAAAC TGCTGTTCAT GGGCGATGAA TTCGGACAGA CAACCGAGTG GAATTATAAA
TCAGAACTGG ACTGGCATCT GCTGGAACAC CTCTCTCACC AGGGCTTACA GCGGTACGTT
AAAGCGCTGA ATCACCTGTA TACCTCCGAA CCCGCATTAT ATATCAAACA ATTCGAGTAC
TATGGCTTCG AATGGGTGAA TGTATCGGAT TATGATAATA GTATACTGGC CTATCTCCGT
AAGAGCTACA AACCGGAAGA AGATATGCTG ATCGTGCTCA ATATGACCCC GGCAGCCCAT
GAGCTGTATC AGTTAGGTAT AGACGGCGGC GGCACATGGC AGGAGATTCT TAATAGCGAT
CACGCCGAGT TTTTTGGTAG TGGAGTAGTG AATGCAGGCA TATTGGAGGC ACAGGCGCTT
CCCCTGAACG GAAAAACCCA TTCTTTACAA CTCCGCATCC CCCCGCTGGG CGCGAGTATT
TTCAAAAGAG CAATAAAATA A
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| Protein sequence | MTVNKKSKLQ PVVPFSLLSA RDVELFQEGT HAHLYEKFGA HTLEYEGVKG TYFAVWAPNA
AYVSVIGDFN EWDHYSHTLY PRWDKSGIWE GFIPQVKKGA LYKYFIRSNS GEELRKGDPY
ANYWEQRPLT ASVTWQLDYK WKDKRWMEQR HKHNSLESPF SVYEVHLGSW RRPDKSNHEL
FYTYAEIAAM LVPYVKDMGF THVELMPVME HPFDGSWGYQ GTGYYAPTSR YGSPQDFMAF
VDAFHHAGIG VILDWVPSHF PYDAHGLYRF DGAHTYEYAD MRKGYHPDWN SYIFNYARSE
VRSFLLSNAV FWLEKYHIDG LRVDAVASMI HLNYSREAGA WEPNELGGEE NLEAVSFLKH
MNETIYKLFP DVQTIAEEST NFYGVSRPVY MGGLGFGMKW MMGWMNDTLA YFKRDPYHRK
WHQDQLTFSI AYAFTENFML PLSHDEVVHG KSPMMYKMPG DDWQKLANLR LMYSYMFTHP
GTKLLFMGDE FGQTTEWNYK SELDWHLLEH LSHQGLQRYV KALNHLYTSE PALYIKQFEY
YGFEWVNVSD YDNSILAYLR KSYKPEEDML IVLNMTPAAH ELYQLGIDGG GTWQEILNSD
HAEFFGSGVV NAGILEAQAL PLNGKTHSLQ LRIPPLGASI FKRAIK
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