| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3086 |
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| Symbol | |
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| ID | 8359251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3803721 |
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| End bp | 3804308 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965260 |
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| Product | alkylhydroperoxidase like protein, AhpD family |
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| Protein accession | YP_003122756 |
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| Protein GI | 256422103 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00777] alkylhydroperoxidase, AhpD family
[TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.39882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0335839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCGCAA CTTCAAATAC TGATACGGCT GTACAGTTGC TGGAAGCAGT AGGGTTAACC
GAGGCGCATC TTTCTGATCG TTTACGTACC CTGGCCAACA CTGACGCCCG TTATCTGAAA
GATCTTAAAA TAAACGTTAC CAACTCATTA TCTGCCGCTA CACTGACCAG AAAGGAGGCA
TACCTCCTGG GTCTGTCAGT TGCAGTAAAT GAGAAACACG TAGAGCTGCA GGCCGCATTT
GAAAAGCTGG CTACACAGGA AGGTGCTACA GACAAGGAGA TTGCTGAAAT CTACAGCTGT
ACATCCCTGA TGAACGCAAA CAACGTGTAC TATCGTTTCC GTCATTTCGT AAATAAGGAG
TTTTACACTG CTACACCAGC AGGTATCCGT ATGAGCATCA TGGCGAATCC GGTTTTAGGT
AAAGAGTTTT TCGAACTGGT GAGCCTGGTG GTATCGGCGT TGAACGGCTG TGAGATGTGC
GTGACTTCAC ACGAAGATGC GTTACTGAAA CATGGTACTT CACAACAGCG TGTGTTGGAA
GGAGTGAGAT TAGGTGCTGT ATTGAGAAGC CTGGTAGTAC TGCTGTAA
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| Protein sequence | MFATSNTDTA VQLLEAVGLT EAHLSDRLRT LANTDARYLK DLKINVTNSL SAATLTRKEA
YLLGLSVAVN EKHVELQAAF EKLATQEGAT DKEIAEIYSC TSLMNANNVY YRFRHFVNKE
FYTATPAGIR MSIMANPVLG KEFFELVSLV VSALNGCEMC VTSHEDALLK HGTSQQRVLE
GVRLGAVLRS LVVLL
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