Gene Cpin_3064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3064 
Symbol 
ID8359229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3779991 
End bp3781256 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content45% 
IMG OID644965238 
Productaspartate kinase 
Protein accessionYP_003122734 
Protein GI256422081 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTT TCAAATTTGG AGGTGCAAGT TTAGAAAGCG TTGAACGTAT TCAACAGGTA 
GCTACTATCG TACAGTCATT CCCGGATCAG CAGATACTGA TCGTGATATC GGCGATGGGC
AAGACAACGA ATGAACTGGA GAAAGTGGCG CAGAACTTCT ATCTGCGCAA GCGTGAAATA
GCAGCGCAGC TGCTGCATAA CATTGAAGAG CAACACCTTG AAGTAGCAGA TAAACTGCTG
GGTACCCGGG ATAATCCGGT ATTCGAACAG TTACAGCAAT TCTTTACGGA GGCCGAATGG
ACACTTGGCG AAAAGCCAGG CCGTTCATTC GATTACTATT ACGATCAACT GGTAAGTCTC
GGCGAATTAC TGAGTACTGC TATCGTCAGC GCTTATTTTA ACCTCGCCGG TGTGAATAAT
AACTGGATGG ACGTTCGTGA CGTATTCCGC ACAGACGATA CCTTCCGGGA CGCAAATATC
GACTGGACCG TAACAACACA GAATGTTCAG GAAAAGGTGC TCCCCCTGTT TAAAAAGGCT
AATATCATCA TTACGCAGGG TTTTATCGGC AGTACTGACC AGAATGAAAG TGTAACACTG
GGCCGTGAAG GCAGCGACTA CTCAGCCGCC GTATTTGCCA ATATGCTGAA TGCAGAAAGC
CAGACCATCT GGAAAGATGT GGAAGGTTTG AAAAACGCGG ATCCGAAATT ATTCCCCAAC
ACCATCAATA TCCCTGAAAT TAGTTACAGT GAGGTGATCG AAATGGCTTA TTATGGTGCA
CAGGTGATCC ACCCAAAGAC CATCAAACCA CTCCAGAACA AGCAGATTCC CCTTTATGTA
AAGAGTTTTC TGAATAAAGA CCTTCCGGGT ACCGTGATCA AGGAAGAAAC TGAGACAAAG
CAGTTACCGC CCATCATAGT ACTGAAGAAA AATCAGGTGC TGCTGACCAT CACTTCCCGC
AACTTTGACT TCATCACAGA AGACAGGATC AGCGACGTCT ACGAGCGTTT TCACCAGCTG
AAAATCAAGA TAAATTTGAT GCAGAATGCC GCCATCAGTT TCTCCTGCTG TATTGATAAT
AACCCGGAGA AAATAGAGGC TTTAATGAAG GCATTACACG ATGACTTTAA AATCTCATAT
AACGAAGGTT TGGAATTACT GACCGTTCGT TATAACCAGG ATGGATTGTT GGAAGAACTG
AGCAAAGACA GGACTGTCTT GTTGGAACAA CGATCACTCA TCACAATTCA GCGTTTACTG
AAATAA
 
Protein sequence
MKVFKFGGAS LESVERIQQV ATIVQSFPDQ QILIVISAMG KTTNELEKVA QNFYLRKREI 
AAQLLHNIEE QHLEVADKLL GTRDNPVFEQ LQQFFTEAEW TLGEKPGRSF DYYYDQLVSL
GELLSTAIVS AYFNLAGVNN NWMDVRDVFR TDDTFRDANI DWTVTTQNVQ EKVLPLFKKA
NIIITQGFIG STDQNESVTL GREGSDYSAA VFANMLNAES QTIWKDVEGL KNADPKLFPN
TINIPEISYS EVIEMAYYGA QVIHPKTIKP LQNKQIPLYV KSFLNKDLPG TVIKEETETK
QLPPIIVLKK NQVLLTITSR NFDFITEDRI SDVYERFHQL KIKINLMQNA AISFSCCIDN
NPEKIEALMK ALHDDFKISY NEGLELLTVR YNQDGLLEEL SKDRTVLLEQ RSLITIQRLL
K