| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3049 |
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| Symbol | |
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| ID | 8359214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3763442 |
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| End bp | 3764869 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644965227 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003122723 |
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| Protein GI | 256422070 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.459556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTA AGTTATTTTT AATAGCCGGT CTGGCCGGTC TGCTTACTTT GAGCAGTTGT
AAAAAATTTT TGGAGGAGAA ATCGCAGAGT GACGTGATTC CTAAAACGGC GACAGATTTC
AGAGAATTGC TGATTGGATC CGGATATATG ACTAATTCAG AGCCATTGAA TTTTCTTTAT
TTCATGGATG ATGACGTTGA TTTCTTCCTG GAATATGCAA ATGATCCATC TAATGTAGTA
GGTTCTTATG ATGCACAGGT GAACTACCTC TGGTATACCT GGCAGCCTAA ACTGGCCGAT
ATAAATGGCG TGGGCGTGCT GATTGCAGAA GACCCTTCAG CTACCGCCTA TGCACAGTAT
TACACGAAAA TATTAGGCTG TAATGCTGTA TTGGAAAATA TAGATAAATC TATCGGTTCC
CAGCAGGAAA AAGATCGTGT AAAAGCAGAG GCACTGGCGG TACGGGCAAT GTATTATTTC
CGGCTTGCAA ATGTATATGG AGAGCCTTAT AACTACAACC CAAAGTCGCT TTGTATACCA
TTAAAGGTGA CATCAGGCAT CGTGTCAACA CCCTTGCCGC AGGCCACAGT CGGAGAAGTG
TATGACCTGG TCGTACATGA CCTGCTGGAA GCATCATCAT TGATGGATCC CTTGCAGATT
ATGCGCAGAG ATTATCATAT CAATCAACCT GCCATTCATA TTTTATTGTC AAGAGTATAT
CTCTTTATGG AGAAATGGAA AGAAAGTGTG GCAGAAGCCA ATAAGGTGTT TGAAGAGGGG
GGTAAGATAC TGGACATGAC CACGCTTGCT ACAGAGTCTG GTACATGGCT TACTTATAAT
AATGCTGAGG TAGAGTGGCT GTTTGGTGGC AACACACAGC CTAACCAGAG TACTTATGTG
CCTGCTGCAA GGTTCCTGTC CACCTACGAT AGCAACGACG CCAGGTACAG GGTCGGCTTT
TCTCTGCAAA CAAATACCAA TGTACAACTG GTGTCTAAGC TGCCTACAGG ACTTGATCTG
GCACAAACCT TACGCTCTTC AGAAGCTTTG CTGAACAGGG CAGAAGCCAA TGTGCAACTG
GGTGAACTGG GTAGCGCCCT GAAAGACCTG AATGATCTCC GGCGTAAACG TATTGAGGGG
TATGCGGATG AAGTGATCAC CGATAAGGTA ACCTTGCTGC AGGCAGTACG GGATGAGCGT
CGTAAGGAAT TTGCATACGA AGGTTTCCGT TGGTTTGATC TGCGTCGTTA TGGTATGCCT
GAGATCCAAC ATCGTTATCA GCATGATCTG GGGGAAAGTG TTTTACAATA CAAGCTTACT
AAGAACGATG CTATGTATGT ATTGCCTTTT CCGACAAGTG TGATATTGAA GAATTCGGCA
CTTAAACAGA ACCCTTCTGG TCAGATGCCA GACAGAGTAG GACAATAA
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| Protein sequence | MKRKLFLIAG LAGLLTLSSC KKFLEEKSQS DVIPKTATDF RELLIGSGYM TNSEPLNFLY
FMDDDVDFFL EYANDPSNVV GSYDAQVNYL WYTWQPKLAD INGVGVLIAE DPSATAYAQY
YTKILGCNAV LENIDKSIGS QQEKDRVKAE ALAVRAMYYF RLANVYGEPY NYNPKSLCIP
LKVTSGIVST PLPQATVGEV YDLVVHDLLE ASSLMDPLQI MRRDYHINQP AIHILLSRVY
LFMEKWKESV AEANKVFEEG GKILDMTTLA TESGTWLTYN NAEVEWLFGG NTQPNQSTYV
PAARFLSTYD SNDARYRVGF SLQTNTNVQL VSKLPTGLDL AQTLRSSEAL LNRAEANVQL
GELGSALKDL NDLRRKRIEG YADEVITDKV TLLQAVRDER RKEFAYEGFR WFDLRRYGMP
EIQHRYQHDL GESVLQYKLT KNDAMYVLPF PTSVILKNSA LKQNPSGQMP DRVGQ
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