Gene Cpin_3044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3044 
Symbol 
ID8359209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3756173 
End bp3757009 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content44% 
IMG OID644965223 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003122719 
Protein GI256422066 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC ACTTAGGAAC GCGTATCGCA AGACCATTGG TCTATTTAGG CTTATTGGCA 
ATAGCTACGC TGTTAACTTT CAGCAGTTGT TCTAAAGATG ACAACAATGA ACATCCTTCA
AAAACCTTTG TACTGGTACA CGGTGCTTTT CAGGCGCCTT ATGCATGGCA GTTTGTAAAA
ACAAAACTGG AAGCTTCCGG AAACAACGTA GTTGTTGTGG AGTTGCCAGG CCATGGTCAG
GATCAGACTG ATCCTAAAAA AATTACCATC AACACTTATC GTGATAAAGT GGTGGCCGCG
ATCAATGCAA CAAACGGTCC GGTAGTACTG GTGGGGCATA GTCTTGGTGG CGCGATCATT
ACCGCTGTTG CCGATTCAAT TCCTGGCAAG GTGGAAAGGC TTGTATACCT GGCCGGTTTC
GTTCCTGCTA ACAACCAATC CATTCTTGAT CTGACCACCA TGGATCCTAA TTCTTTGTTT
GGTCCGTCAT TAGAGTTTTC TGCAGATGGC TCGCTTGCTA TTATTTCGAA CGATAAAATC
GTTCCTGTAT TCGCACAGGA TGCCAATGAC GAGGTGAAAA AACTGCTCAT GGACAATAAC
AGACCAGAGC CTATCGCTCC ACAGGCTGAT AAAGTATTTT TAAAGAACCC GGCTTTCGCG
GGCGTTCCCA AATATTATAT TCAAACTATT CAGGACCATG CAATCACTAT TGATCTGCAG
AAAAAGATGA TCAGTGCAGC TGGTATTAAA AATGTTTACT CCGTTGAATC AGGACACTGC
CCGATGCTCA CTCAGGCAGA TAAAGTAAGC GATCTGCTTT TGCAGATTGC AAAGTAG
 
Protein sequence
MKTHLGTRIA RPLVYLGLLA IATLLTFSSC SKDDNNEHPS KTFVLVHGAF QAPYAWQFVK 
TKLEASGNNV VVVELPGHGQ DQTDPKKITI NTYRDKVVAA INATNGPVVL VGHSLGGAII
TAVADSIPGK VERLVYLAGF VPANNQSILD LTTMDPNSLF GPSLEFSADG SLAIISNDKI
VPVFAQDAND EVKKLLMDNN RPEPIAPQAD KVFLKNPAFA GVPKYYIQTI QDHAITIDLQ
KKMISAAGIK NVYSVESGHC PMLTQADKVS DLLLQIAK