Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3044 |
Symbol | |
ID | 8359209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3756173 |
End bp | 3757009 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644965223 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003122719 |
Protein GI | 256422066 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACAC ACTTAGGAAC GCGTATCGCA AGACCATTGG TCTATTTAGG CTTATTGGCA ATAGCTACGC TGTTAACTTT CAGCAGTTGT TCTAAAGATG ACAACAATGA ACATCCTTCA AAAACCTTTG TACTGGTACA CGGTGCTTTT CAGGCGCCTT ATGCATGGCA GTTTGTAAAA ACAAAACTGG AAGCTTCCGG AAACAACGTA GTTGTTGTGG AGTTGCCAGG CCATGGTCAG GATCAGACTG ATCCTAAAAA AATTACCATC AACACTTATC GTGATAAAGT GGTGGCCGCG ATCAATGCAA CAAACGGTCC GGTAGTACTG GTGGGGCATA GTCTTGGTGG CGCGATCATT ACCGCTGTTG CCGATTCAAT TCCTGGCAAG GTGGAAAGGC TTGTATACCT GGCCGGTTTC GTTCCTGCTA ACAACCAATC CATTCTTGAT CTGACCACCA TGGATCCTAA TTCTTTGTTT GGTCCGTCAT TAGAGTTTTC TGCAGATGGC TCGCTTGCTA TTATTTCGAA CGATAAAATC GTTCCTGTAT TCGCACAGGA TGCCAATGAC GAGGTGAAAA AACTGCTCAT GGACAATAAC AGACCAGAGC CTATCGCTCC ACAGGCTGAT AAAGTATTTT TAAAGAACCC GGCTTTCGCG GGCGTTCCCA AATATTATAT TCAAACTATT CAGGACCATG CAATCACTAT TGATCTGCAG AAAAAGATGA TCAGTGCAGC TGGTATTAAA AATGTTTACT CCGTTGAATC AGGACACTGC CCGATGCTCA CTCAGGCAGA TAAAGTAAGC GATCTGCTTT TGCAGATTGC AAAGTAG
|
Protein sequence | MKTHLGTRIA RPLVYLGLLA IATLLTFSSC SKDDNNEHPS KTFVLVHGAF QAPYAWQFVK TKLEASGNNV VVVELPGHGQ DQTDPKKITI NTYRDKVVAA INATNGPVVL VGHSLGGAII TAVADSIPGK VERLVYLAGF VPANNQSILD LTTMDPNSLF GPSLEFSADG SLAIISNDKI VPVFAQDAND EVKKLLMDNN RPEPIAPQAD KVFLKNPAFA GVPKYYIQTI QDHAITIDLQ KKMISAAGIK NVYSVESGHC PMLTQADKVS DLLLQIAK
|
| |