| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3041 |
|---|
| Symbol | |
|---|
| ID | 8359206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 3754002 |
|---|
| End bp | 3754361 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644965220 |
|---|
| Product | transcriptional regulator, HxlR family |
|---|
| Protein accession | YP_003122716 |
|---|
| Protein GI | 256422063 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAG CGCTTCAGAA TCCAGAGAAC TGCGCGGTCG TACGCACAGT AGGGTATATT
GGAAACAAGT GGAAGCCGAT CATACTGATC AGGCTCCTCA CGAGTGGTAA AGTTCGTTTT
GGCCAGCTGG CCTCCAAAAT ACCTGACATA TCCCGAAAAA TTTTAAGTCA GCAGTTAAAG
GAGCTGGAAG AGGACAAACT GATTATTCGT CACAGTTTTA TGGAAAAACC ACCACGCGTT
GAATATGAGC TAAGCAGTCT GGGAAAAACA CTCATTCCTG TATTAAAGGC GATGTTTGAT
TGGGGTAATC AGCTGGAAGA GCCTGATAAA AGATGCATCT GGGAGCCTGT GATTGATTAA
|
|---|
| Protein sequence | MRKALQNPEN CAVVRTVGYI GNKWKPIILI RLLTSGKVRF GQLASKIPDI SRKILSQQLK
ELEEDKLIIR HSFMEKPPRV EYELSSLGKT LIPVLKAMFD WGNQLEEPDK RCIWEPVID
|
|---|
| |