Gene Cpin_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3022 
Symbol 
ID8359186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3742409 
End bp3742870 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content42% 
IMG OID644965202 
ProductDoxX family protein 
Protein accessionYP_003122699 
Protein GI256422046 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.43506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTAA AATTAAAGAG AAATAGATAT TCGGATTGGT CGGTTGCCGG ATTACGTACA 
ATTGCCGGGA TTGGTTTTAT TGTACACGGC TGGGCCAAGA TTAGCCGGGG AACAGCAGGT
TTTGAAAAAC TACTTTTACA AATTCATACG CCCTATGCCC ACTTCATGAG TATTTTGGTT
CCCTATCTGG AACTAATCGG AGGTATGTTG CTCATACTCG GCTTTCTCAC GCGAATTATA
TCCACAGCGC TTATCGTTGT AATGTTAACT GCAATGTTCA CGATACATAT CCGTTATGGC
TTCAGCACTA TCCAAACGAC GGGCCTGAAT ACGGATGGCC CAATATTCGG TCCGCCGGGA
TATGAAATCA ATCTGCTCTA TATTGGAATT CTTGCTTTTC TATTGATAAA TGGAGCAGGA
AGAGTATCAG CAGATAGTGG AATAAAAAGA GGAAGCGCAT GA
 
Protein sequence
MQLKLKRNRY SDWSVAGLRT IAGIGFIVHG WAKISRGTAG FEKLLLQIHT PYAHFMSILV 
PYLELIGGML LILGFLTRII STALIVVMLT AMFTIHIRYG FSTIQTTGLN TDGPIFGPPG
YEINLLYIGI LAFLLINGAG RVSADSGIKR GSA