Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3022 |
Symbol | |
ID | 8359186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3742409 |
End bp | 3742870 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644965202 |
Product | DoxX family protein |
Protein accession | YP_003122699 |
Protein GI | 256422046 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.43506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTAA AATTAAAGAG AAATAGATAT TCGGATTGGT CGGTTGCCGG ATTACGTACA ATTGCCGGGA TTGGTTTTAT TGTACACGGC TGGGCCAAGA TTAGCCGGGG AACAGCAGGT TTTGAAAAAC TACTTTTACA AATTCATACG CCCTATGCCC ACTTCATGAG TATTTTGGTT CCCTATCTGG AACTAATCGG AGGTATGTTG CTCATACTCG GCTTTCTCAC GCGAATTATA TCCACAGCGC TTATCGTTGT AATGTTAACT GCAATGTTCA CGATACATAT CCGTTATGGC TTCAGCACTA TCCAAACGAC GGGCCTGAAT ACGGATGGCC CAATATTCGG TCCGCCGGGA TATGAAATCA ATCTGCTCTA TATTGGAATT CTTGCTTTTC TATTGATAAA TGGAGCAGGA AGAGTATCAG CAGATAGTGG AATAAAAAGA GGAAGCGCAT GA
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Protein sequence | MQLKLKRNRY SDWSVAGLRT IAGIGFIVHG WAKISRGTAG FEKLLLQIHT PYAHFMSILV PYLELIGGML LILGFLTRII STALIVVMLT AMFTIHIRYG FSTIQTTGLN TDGPIFGPPG YEINLLYIGI LAFLLINGAG RVSADSGIKR GSA
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