Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3015 |
Symbol | |
ID | 8359179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3732310 |
End bp | 3733011 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644965195 |
Product | putative competence protein |
Protein accession | YP_003122692 |
Protein GI | 256422039 |
COG category | [R] General function prediction only |
COG ID | [COG4469] Competence protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCTTTG CGTTAGTTGA TGGTCAACTT ATTGAAGCTC TATATGCGCT AGAAGGAACT TGCCCTGGAT GTGGAAAGCA AGTTTTTGCA AGATGTGGTG ATGTGAGAGT AGCCCATTGG GCACATGCCG GCGAAAAGAT GTGCGATAGG TGGTGGGATT CAGAAACTGA ATGGCATCGA TCCTGGAAAA GTCAATTTCC CCAACCATGG CAAGAAGTTT TTAGGCAGGA TGTACGAACT CATGAAATTC ATATTGCCGA TGTCCAAACT GAACATGATT TAGTAATTGA ATTTCAACAT TCAAGTATTA AAAAAAAAGA ACGCGACGCC CGGGAAAGTA TTTATGGGAA TATGGTTTGG GTGGTTGATG GAGCATTCCG AAAGAATGAT TATTCGCGTT TTTTTAAAAA TCAGGGGAAG TTTAAGTTTA CTGAAGAGAG TGGCATATTC CATGTTGACC GTCCCGAAGA ATGCTTTCAC TCTACATGGC TGAGCAGCTC CAAACCTGTT ATATTCGACT TTAGAGCTGT AGCCCCGGAA GGTAATATTT TCGATGCACA CAAATATCTG TACTGCTTGT TCCCGATCTC AATTGGAGGA AGCGCCGTTT TTGCGGAGTT AACACCTGAT GATTTCATTA AGAAAGTGAT TAAAGGTGAA TGGCTTTTAT GGTTTGAGGG ACTTATGAAC GGTTTTAGAT AA
|
Protein sequence | MRFALVDGQL IEALYALEGT CPGCGKQVFA RCGDVRVAHW AHAGEKMCDR WWDSETEWHR SWKSQFPQPW QEVFRQDVRT HEIHIADVQT EHDLVIEFQH SSIKKKERDA RESIYGNMVW VVDGAFRKND YSRFFKNQGK FKFTEESGIF HVDRPEECFH STWLSSSKPV IFDFRAVAPE GNIFDAHKYL YCLFPISIGG SAVFAELTPD DFIKKVIKGE WLLWFEGLMN GFR
|
| |