Gene Cpin_3015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3015 
Symbol 
ID8359179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3732310 
End bp3733011 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content41% 
IMG OID644965195 
Productputative competence protein 
Protein accessionYP_003122692 
Protein GI256422039 
COG category[R] General function prediction only 
COG ID[COG4469] Competence protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTG CGTTAGTTGA TGGTCAACTT ATTGAAGCTC TATATGCGCT AGAAGGAACT 
TGCCCTGGAT GTGGAAAGCA AGTTTTTGCA AGATGTGGTG ATGTGAGAGT AGCCCATTGG
GCACATGCCG GCGAAAAGAT GTGCGATAGG TGGTGGGATT CAGAAACTGA ATGGCATCGA
TCCTGGAAAA GTCAATTTCC CCAACCATGG CAAGAAGTTT TTAGGCAGGA TGTACGAACT
CATGAAATTC ATATTGCCGA TGTCCAAACT GAACATGATT TAGTAATTGA ATTTCAACAT
TCAAGTATTA AAAAAAAAGA ACGCGACGCC CGGGAAAGTA TTTATGGGAA TATGGTTTGG
GTGGTTGATG GAGCATTCCG AAAGAATGAT TATTCGCGTT TTTTTAAAAA TCAGGGGAAG
TTTAAGTTTA CTGAAGAGAG TGGCATATTC CATGTTGACC GTCCCGAAGA ATGCTTTCAC
TCTACATGGC TGAGCAGCTC CAAACCTGTT ATATTCGACT TTAGAGCTGT AGCCCCGGAA
GGTAATATTT TCGATGCACA CAAATATCTG TACTGCTTGT TCCCGATCTC AATTGGAGGA
AGCGCCGTTT TTGCGGAGTT AACACCTGAT GATTTCATTA AGAAAGTGAT TAAAGGTGAA
TGGCTTTTAT GGTTTGAGGG ACTTATGAAC GGTTTTAGAT AA
 
Protein sequence
MRFALVDGQL IEALYALEGT CPGCGKQVFA RCGDVRVAHW AHAGEKMCDR WWDSETEWHR 
SWKSQFPQPW QEVFRQDVRT HEIHIADVQT EHDLVIEFQH SSIKKKERDA RESIYGNMVW
VVDGAFRKND YSRFFKNQGK FKFTEESGIF HVDRPEECFH STWLSSSKPV IFDFRAVAPE
GNIFDAHKYL YCLFPISIGG SAVFAELTPD DFIKKVIKGE WLLWFEGLMN GFR