Gene Cpin_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2998 
Symbol 
ID8359161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3704288 
End bp3705397 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content51% 
IMG OID644965177 
Product8-amino-7-oxononanoate synthase 
Protein accessionYP_003122675 
Protein GI256422022 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0168149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAG ATTTTCTTTT GCAGCAATTG GCGCAGCGCG AGGCGCAGCA CGCATTCCGC 
CGGCTGAGAT TACCAGCGCC CGGATCGGTG GACTTCTGTT CCAATGATTA CCTGGGACTC
GCACAGAGTG CAGCCATGCA GGAAGGAGTC CATACCTTAT TACAGGCGAG GCCGTATATG
CATGGTAGTA CCGGATCACG TCTGCTGGCC GGCAACTATG CCTGGGTAGA GGAAGCAGAA
GAAATGCTGG CTACCTTTCA TCAGGCAAAG GCAGGACTGA TTTATAATTC AGGGTATGAT
GCCAATCTGG GCCTGTTTTC AGCGGTCCCG CAGAAAGGGG ATACCATCAT TTATGACCAG
TTAATACATG CCTCCATCAG GGATGGGATC CGCTTATCCA AGGCACAGGC ATTTTCTTTT
TTGCACAATG ACCTGGAAGA CCTGTTGAAG AAATTGCAAC ATGCTGTTGG TAATATTTTC
GTGGCAGTAG AGTCTGTGTA TTCCATGGAT GGGGATTTTG CGCCTTTGCA GGAAATGGCA
GCGCTTTGCG ATAAACATGG CGCACATCTG GTTGTGGATG AAGCGCATGC GACCGGTGTA
GTGGGCTTAA AAGGAGAAGG GCTCGTACAG CACCTGGGAT TACAGGATGC CTGCTTTGCC
AGAGTACACA CCTTCGGTAA AGCGGTGGGT TGTCATGGGG CGGTGGTATT AGGTAGTCCG
CACCTGCGGG ATTACCTGGT CAACTTTTCC CGTTCATTTA TTTATACCAC GGCATTACCG
CCTACAGCCA TTGCAGCAAT AGTGGCCAGT TATGAACTTT TCCCGTATAT GCAGGCGGCC
AGGGAACACG TGTCTGCTTT AATCAACCGT TTCAGGAAAG GAGTAGTGGG TTTTAGTACT
TTATACAGCG AGACGCCTAT ACAGATCGTC CTGACCCCTG GAAATGAAGA GACGCGGAGG
ATCGCGATCG GGTTACAGTC CGCCGGACTT GATGTCCGGC CTATCCTGCA TCCGACGGTC
CCTAAAGGCA AAGAGCGATT GCGGATTGTC TTACACAGCT TCAATACGGA GGCAGAAGTA
GACCGTCTGA TAAAGGGCCT GGCAGGATAA
 
Protein sequence
MKEDFLLQQL AQREAQHAFR RLRLPAPGSV DFCSNDYLGL AQSAAMQEGV HTLLQARPYM 
HGSTGSRLLA GNYAWVEEAE EMLATFHQAK AGLIYNSGYD ANLGLFSAVP QKGDTIIYDQ
LIHASIRDGI RLSKAQAFSF LHNDLEDLLK KLQHAVGNIF VAVESVYSMD GDFAPLQEMA
ALCDKHGAHL VVDEAHATGV VGLKGEGLVQ HLGLQDACFA RVHTFGKAVG CHGAVVLGSP
HLRDYLVNFS RSFIYTTALP PTAIAAIVAS YELFPYMQAA REHVSALINR FRKGVVGFST
LYSETPIQIV LTPGNEETRR IAIGLQSAGL DVRPILHPTV PKGKERLRIV LHSFNTEAEV
DRLIKGLAG