Gene Cpin_2976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2976 
Symbol 
ID8359139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3669974 
End bp3670672 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content45% 
IMG OID644965156 
Producthypothetical protein 
Protein accessionYP_003122654 
Protein GI256422001 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5266] ABC-type Co2+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0640224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCACATTGAG CATTGCGCTG ATGTTATGCG CTTTCCTGGC CTCCGCACAT 
GCAGTCTGGA TTGAAACCGC GCTGAAAGGC ACGAAGAATA AGTCGCAGGA TGTGCGCGTT
TACCTGGGTG AATATGCAGA AAATCAAAGA GACTCCGTTA CTCACTGGTT CAGCAATTTA
AAGGATGTAA AGCTTTATGT GACAGTGCCT GATGGCAAGC GGGAAGAAAT TGCTATCAAA
GAAAACGGGA ATCATCTTGC AGGTAACTTC ATACCGGCGA CAGATGGTAA CTATACACTG
TCTATCAGCC ATACGGTAGA AACGATTTAC GGTGAAACCA AAATAGAATA TTATGCAACG
GCTACGGTAA TCGTAGGGAA AGAAACGCCT TCACAATTAT CAGCAAGTAC TGCACTGGCT
GTGGTACCGG CTGCTGAAGA GCCTAAAGGT ACAGTGGGAC TGACTGTATT ACGCGATAAA
CTGCCACTAG CTGCTGCGAA GATCGAAGCG ATCTCTCCGG ATGGCTGGGT AAAGGAATTC
AAAAGCAATG ACAAAGGAGA AGCATCTTTT GTACCACTGC AATCAGGTCA GTACCTGTTA
GAAGTATCTG CGAATGAAAA GACGCCTGGT ACGCACAATG GTAAGCCTTA CAAAACAGTA
GCGCATATCG TTACGCACTG TATCAACGTT AAAAAATAA
 
Protein sequence
MKKITLSIAL MLCAFLASAH AVWIETALKG TKNKSQDVRV YLGEYAENQR DSVTHWFSNL 
KDVKLYVTVP DGKREEIAIK ENGNHLAGNF IPATDGNYTL SISHTVETIY GETKIEYYAT
ATVIVGKETP SQLSASTALA VVPAAEEPKG TVGLTVLRDK LPLAAAKIEA ISPDGWVKEF
KSNDKGEASF VPLQSGQYLL EVSANEKTPG THNGKPYKTV AHIVTHCINV KK