Gene Cpin_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2960 
Symbol 
ID8359123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3644612 
End bp3647212 
Gene Length2601 bp 
Protein Length866 aa 
Translation table11 
GC content47% 
IMG OID644965141 
Productphosphoenolpyruvate synthase 
Protein accessionYP_003122639 
Protein GI256421986 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000180391 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGCTT ACATACTTGG ATTGCAGGAT ATTGATGCAT CGGCATTTGC ATTTGTAGGG 
GGCAAAGGCG CCAATCTGGG CGTTTTATCT CAGATAGAAG GAATTAATGT GCCCGGAGGT
TTTTGTGTTA CTACAACGGC TTATAAGGCG ATTACAGCGA ATAGTCCGGA ACTCAGTTCC
CTGCTGGATC AGCTGAATAC CCTGAAAGCG GATGACAGGA AAGGGATCAG TGAAGTCTGT
ACCTCGATTC GTCGCCTTAT CGAAAATATT ACCATTCCGG ACGATATCAC CGCAGCGATC
AGCGCATACC TCGACACGTT CGATGAACAA CAGGCTTTCG CCGTACGTTC CAGTGCTACC
GCGGAAGACC TGCCGACGGC ATCCTTTGCT GGTCAGCAGG ATACCTATCT GAATATTATC
GGAAAAGAAG CCATTCTGCA ACATATCAGC CGTTGCTGGG CCTCACTGTA CACGGACAGG
GCGGTTACTT ACCGCCTGCA AAACGGATTT GATCATAAAA AGGTATATCT GTCTGTCGTC
GTGCAGCAGA TGATCTTTCC CGAAGTCGCC GGTATCATGT TTACCGCAGA TCCGGTGACT
GCCAACAGAA AAGTATTATC TATCGATGCC AGTTTCGGCT TAGGCGAAGC CCTGGTGTCC
GGTATCGTCA ATGCGGATAA TTATAAGGTA CGTGCCGGTA AAGTGATCAG CAGAAAAATC
GCTGTAAAGA AACAAGCTGT TCTTTCACTG ACAAAGGGTG GTACCGCCAC ACAGGAGATT
CCTCCGGAAC GGCAACATAC GCCCTCGCTG ACCAATAAAC AGGTGCTCGC ATTGAGTGAG
CTTGGAAGAA AGATAGAAAG ACATTTTGGT CAGCCGCAAG ACATAGAATG GTGTCTGGCA
AACGGTACGT TTTTTATCGT CCAGAGTCGT CCTATCACCA CTTTATACCC GATCCCCGAA
GCAGATGATA CCGAAAACCG GGTATATGTT TCTGTCGGAC ATAACCAGAT GATGACGGAC
GCCATGAAGC CATTGGGACT CTCTTTTTTC CTGTTGATGA CGCCTGCCCT GATGCGGGTC
GCCGGCGGGA GAATATTTAT AGATATTACC CGGCAACTCT CGCAACCTGC CAGCAGGAAA
GGGGTAATAG AAACGCTGGG AAAATCCCAT CCCCTGATAA AAGATGCACT CCTGACCATT
ACAAAGCGGA ATGATTTTAT CAGGAAGATC CCGGATGACA TGAATACACC TGCTAAAGTA
CATCCGCTGG CAGCAGCACA GACGCCTGTT GAAAACGATC CGGCAATTGT TACAGATCTG
ATCAATACTA CACAGGCATC CATCGCAGCC TTAAAACAAA ACATGCAGCA CTTGTCTGTA
CCCGATAGCC TGGATTTCAT ATTGGAAGAT ATCCGGCAAC AAAAAGCCGC CATGTTTAAA
GTACAGAGCA TGGCTGTGAT TATGGCGGGC ATCAATGCGA CTGAATGGCT CAATGATAAA
ATGAATAAAT GGCTGGGTGA AAAAGGCGCC GCCGATATCC TTTCTCAATC CGTCGCCAAT
AACATCACTT CTGAAATGGG CCTGGCACTG CTGCACGTCG CAGATGTTAT TCGTCCTTAC
CCGGCCGTCG TTGCCTACCT GCAACAAACA AAAGCAGATA ACTTCCTTGA TGAATTACCT
GCACTCGAAG GTGGTCAGGA ATCCCGTAAT GCCATTCTTG CTTTCCTCGA TAAATACGGT
ATGCGATGTG TCGGAGAAAT TGATATCACG AAAACCCGCT GGAGCGAAAA GCCTGCGATA
TTATTGCCTG CTATTCTCAG TAATATCAAG AACTTCGAAA CGGGTGCCGG CTGGCGAAAA
TTTGAAGAAG GGCAACAGGA CGCCCGCCAG AAAGAACAGG AATTATTAGC CCGTTTACTG
CAATTGCCCA ATGGTAAACG GAAGGCCCGT GACACCAAAG AAATGATCAG CCGTCTCCGG
AATTTTATCG GCTATCGGGA ATACCCTAAA TATGGTATGG TCAATCGCTA TTTCATCTAT
AAACAGGCAT TACTGAAAGC TGCGGAGGTA CTTACACAGG CTGATATTAT CCGCGAAAAG
GAGGATATCT TTTACCTCTC TTTTGAAGAA CTACAGGAAG TCGTACGCAG CGCTAAGCTG
GATAACGCAA TGATCAGTCA ACGGAAAGCT GCGTTTACCT TATATGAAAA GCTAACACCC
CCTCGTGTCA TTACATCTGA CGGTGAAGTT ATTACAGGTA GATATAAACA TACATATCTT
CCGGCTGATG CCATTGCAGG TATGGCGGTT TCTGCCGGTG TAATAGAAGG TCGTGCACGC
GTAATCCTGA ACATGGAGGA AGCGGATCTG GAAGAAGGAG ATATACTGGT GACTGCCTTT
ACCGATCCCA GCTGGACGCC CTTATTTGTG TCTATAAAAG GACTGGTCAC AGAAGTCGGA
GGATTAATGA CACATGGTGC TGTCATTGCC CGGGAATATG GTTTGCCTGC AGTGGTAGGT
GCAGACAATG TCACTAAATT GATTAAGGAT GGACAAAGAA TCCGGGTCAA TGGCACAGAA
GGGTATATCG AGATATTATA A
 
Protein sequence
MSAYILGLQD IDASAFAFVG GKGANLGVLS QIEGINVPGG FCVTTTAYKA ITANSPELSS 
LLDQLNTLKA DDRKGISEVC TSIRRLIENI TIPDDITAAI SAYLDTFDEQ QAFAVRSSAT
AEDLPTASFA GQQDTYLNII GKEAILQHIS RCWASLYTDR AVTYRLQNGF DHKKVYLSVV
VQQMIFPEVA GIMFTADPVT ANRKVLSIDA SFGLGEALVS GIVNADNYKV RAGKVISRKI
AVKKQAVLSL TKGGTATQEI PPERQHTPSL TNKQVLALSE LGRKIERHFG QPQDIEWCLA
NGTFFIVQSR PITTLYPIPE ADDTENRVYV SVGHNQMMTD AMKPLGLSFF LLMTPALMRV
AGGRIFIDIT RQLSQPASRK GVIETLGKSH PLIKDALLTI TKRNDFIRKI PDDMNTPAKV
HPLAAAQTPV ENDPAIVTDL INTTQASIAA LKQNMQHLSV PDSLDFILED IRQQKAAMFK
VQSMAVIMAG INATEWLNDK MNKWLGEKGA ADILSQSVAN NITSEMGLAL LHVADVIRPY
PAVVAYLQQT KADNFLDELP ALEGGQESRN AILAFLDKYG MRCVGEIDIT KTRWSEKPAI
LLPAILSNIK NFETGAGWRK FEEGQQDARQ KEQELLARLL QLPNGKRKAR DTKEMISRLR
NFIGYREYPK YGMVNRYFIY KQALLKAAEV LTQADIIREK EDIFYLSFEE LQEVVRSAKL
DNAMISQRKA AFTLYEKLTP PRVITSDGEV ITGRYKHTYL PADAIAGMAV SAGVIEGRAR
VILNMEEADL EEGDILVTAF TDPSWTPLFV SIKGLVTEVG GLMTHGAVIA REYGLPAVVG
ADNVTKLIKD GQRIRVNGTE GYIEIL