| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2947 |
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| Symbol | |
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| ID | 8359110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3625558 |
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| End bp | 3629043 |
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| Gene Length | 3486 bp |
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| Protein Length | 1161 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965128 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003122626 |
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| Protein GI | 256421973 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.594997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAA CCAGTGCCTT TCTGCTCCTT TTTTGTTTAC ATGTGTCAGC CAACACCTTT
TCCCAGTCAA TTACCTTCTC CGGAAGAGGG ATACCCATGA AACAGGTATT CGCGGCAATA
AAAAAACAAA CCGGATATGT AGTATGGGGA AAGTCGGATC TGCTGCAACA AGCAGATGCA
GTTTCGGTCT CCGTACAAAA CATGCCGCTA CTGAGTTTCC TGGACCTCAT CGTTAAAAAC
CAGTCTTTCA ATTATAAGAT AACAGACAAT ACTATTTTCA TTTATAGTAA AAATGATCCT
GTATCCGGCG ATGCCACTAT CGCAAAAGTC ACCCCCTTGG CGGGACGGGT AACCGATAGT
CTGGGCGTAC CATTGATCGG TGCTACCGTA ATAGTAACAG GTGGTGGCCG GTCGGCCATT
ACCGATATGA ATGGCAGCTT TTCCGTTCCT GCAGATGCAG GGAATGTGCT GCGCGTCAGC
TTTATTGGTT ATCAAAACAA AGAAATTGTT GTTACCACCG CCATGCAACA GGGAGGCAAC
ATCGGCACCA TCATACTGAC CCACGTTTCT TCTACGCTGA ATGAATTGAA CGTAACCGCC
AACACCGGCT ACCAGTCTAT CCCAAAAGAA CGCGCTACCG GCTCGTTTGG CGTTATTACC
GAAACCACAC TGGGCGCCAG GATGGAAACA AGTATTATGG ATCGCCTGGA AGGCACCGTG
CCGGGGCTTT TCATTCAAAA CGGCGTGCCT ACTATCCGCG GTCTGTCTAC TTTATATGGC
AATCAGCAGC CATTATATGT GGTAGATGGA TTTCCTTATG AAGGAGACCT CAATTATATT
AATCCTGCCG ATGTGGTAAA CGTAACTGTG ATGAAAGATG CAGCAGCAGC TTCTATCTAT
GGCACACGCG CGGCCAATGG CGTGATTTCC ATTACCACCC GTCACGGCAG TAGCCGGAAG
CCGGTTGTGA CCTTTAGCAG TGGCGTTTTT TTCTCGGCCA AACCAGACGC CGGTTATATG
AATCTGCTCA ATTCCTCCCA GATGGTGGAT CTGCAACAGG AACTCTTTAA CAAATGGCAC
CCAGGCTTCA GTGACGGGAT CAGACGCACA GGCAACACCA AAGTGCTGCA GGCATTGTAT
AACCAGGAAC AGGGCTATAT TACTCAGGCG GAACTGGATG CGACCCTGGG AAGGCTTAAA
ACACAGGACG GGCAAAGTCA GCTCGAAGAT CTGTTCATGC GCAACAATGT AAAACAACGC
CATGCCTTTT CTGCCAGTGG AGGCAACGAT ATACATCAAT ACAATATGAT GATAAACTAT
ACCGGCAATA GCGGGTATGG TTTACGAACC AGCAGCAACG ATATCAACCT GGGGCTGAGA
GACCGCGTAA AAGTGTTTCG CTGGCTGGAT GCCGAAATCG GTACCAACAC CAACATCCGC
ACAGGAAAAT ATCAACCCGA AAGCCCCGAA TCGTTTTACT GGAACATGCC CTATGAAATC
ATCCGCAATC CCGATGGCAG TCCGGCTGAT TTCACGAAAC TAAAATCGGA TTATGAGATC
CAGCGTCTGA TCAGCCTGGG CCTGCATGAT GAATCTTACC ATCCACTCGA AGAAACGGAC
CGCGCTGATT TGTCGTATTG GTCGAACTAC TTCCGCGTAC AGGGGGGCTT TACGGCAAAG
ATTATTGAAG GACTCACGCT CGATCTGAAA TACCAGACCG AACGCGGCAC GAGCTATAAT
AAGCAGTATT ACAACTCGTC CTCTTACTAT GCCAAAAGGA TGATCAACGA TGCCGCGCAG
GTCATCGACA ATGAGCCGAT AAAAAATGTT CCCGACGGCG GACAACTATA CGAAACACGC
GGTAACTCCA AATCGTACAC CGCACGTATG CAGCTGAACT TTGACCGGAC TTTCGCCTTG
AAACATCACA TCTCCGCCCT GGCCGGCGCC GAACGCAGGG CCATTTCGAA TGCCAGTACC
TCCGTATTTA AAATGGGCTA CAGCGATAAC AACCTGCAGT TCCAGCCAGT AAACGAACTC
GCACTCGGCA ACCTTAAAGG AACGCAGTCG CTAACCAGCA CCTTTGCCCT TCCCTTTAAC
GACGGCAACA ATTTCTATTA TGGCGAAGAA AGATACATTT CAATATATGG CAACGCTGGT
TACACCTATA ACGGCCGATA CAATCTGACA GGTAGTGTAC GCGTAGACAA CTCCAACCTC
TTTGGCACCG ATCCCCGCTA CCGTTACCTG CCGTTATGGT CGGTAGGCGC GAGCTGGCGA
ATCACCGAAG AAAACTTCAT GAAAGATATC AACTGGCTGA ACAGTCTGAG CATTCGTTCG
ACCTACGGTT TAGGTGGCAA CGTGGCCCGC ACCGTCGGAC CGTTCCTTCA GGCACGTTCT
ACATTTTTTG CTGAAGCCAA TGCCACCGCC ACCGATATCA TATATCCGCC CAACAAATCA
TTGCGCTGGG AAAAAACGGC CACCACCAAC CTCGGTATAG ACTTCGCCGT ACTGAACAAC
CGGATTTCCG GGTCTATGGA TTATTACGTG CGCAATACCA CAGATTTACT CGGCGAAAAA
ACGATCGATC CCACTAATGC CTTTCCCAAC GCATTGATCA ACTATGGCAG TCTGAATAAC
AAAGGTTTCG AACTGGCATT GAACACCCGC AATATTGCAG GGAAGAAATT TTCCTGGAAC
AGTACACTGG CATTGAGTTT CAACAAAAAC AGGATGACTG AGATCAACAC CAAAGACGAA
ACTGTTTATA CGCTTACCGG CGGCTATGGT GTAAACAAAA TCGGTTATCC GATGGATGCC
GTATTCAGCT TCCGTTCAGC AGGACTCGAT CCCACCAACG GTTCCATGCT GGTATACGAT
GCCGACGGGA AAATAGTCCA GAACTATGAT CAGAGCGGTA CAATCGTAGC CAACATGACC
AATGTGAAAG GGTTGGTATA CAGCGGAACA CTTCGCCCCA TCTACACTGC CGGACTTACC
AACAGCTTTA CCTATAAACA GCTTTCCCTC AGTGTAATGA TCATTTCCAA TGGTGGCAAC
GTGATCCGCG ATGTAGTGCC TACCATCCAG ACCAACTTTC CACTCAGGAA CACCGACCAG
CGTGTAGCGA ATTTCTGGCG TAAACCGGGC GATGAGAAAA TACCAGGTAT TATGCCTGCC
CCCGACCTTA AAGGCGATGG CGGCAGTTAT TACACACTCC TCTCCTATGC GTCTGACCGC
AACGTACTCA AAGGCGATTA CGTAAAAGTG CGCGATATTG CCGTCACCTA TAACTTTGAA
CGGTTGCTGT CGCGGATCAG AAAACTGGCT GCTGCCAAAC TGACTCTCCA GGTGCAAAAT
CCATTTTCGT GGCACGCCAA CGATGCCGGT ATAGATCCGG AAGCGTACGA ACACGCCTCA
CAATATGCCA ACAGGCTGTT GCCGGTGATG CCAGTTTACT CAGCAGGCAT TGATATCACC
TTTTAA
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| Protein sequence | MKLTSAFLLL FCLHVSANTF SQSITFSGRG IPMKQVFAAI KKQTGYVVWG KSDLLQQADA
VSVSVQNMPL LSFLDLIVKN QSFNYKITDN TIFIYSKNDP VSGDATIAKV TPLAGRVTDS
LGVPLIGATV IVTGGGRSAI TDMNGSFSVP ADAGNVLRVS FIGYQNKEIV VTTAMQQGGN
IGTIILTHVS STLNELNVTA NTGYQSIPKE RATGSFGVIT ETTLGARMET SIMDRLEGTV
PGLFIQNGVP TIRGLSTLYG NQQPLYVVDG FPYEGDLNYI NPADVVNVTV MKDAAAASIY
GTRAANGVIS ITTRHGSSRK PVVTFSSGVF FSAKPDAGYM NLLNSSQMVD LQQELFNKWH
PGFSDGIRRT GNTKVLQALY NQEQGYITQA ELDATLGRLK TQDGQSQLED LFMRNNVKQR
HAFSASGGND IHQYNMMINY TGNSGYGLRT SSNDINLGLR DRVKVFRWLD AEIGTNTNIR
TGKYQPESPE SFYWNMPYEI IRNPDGSPAD FTKLKSDYEI QRLISLGLHD ESYHPLEETD
RADLSYWSNY FRVQGGFTAK IIEGLTLDLK YQTERGTSYN KQYYNSSSYY AKRMINDAAQ
VIDNEPIKNV PDGGQLYETR GNSKSYTARM QLNFDRTFAL KHHISALAGA ERRAISNAST
SVFKMGYSDN NLQFQPVNEL ALGNLKGTQS LTSTFALPFN DGNNFYYGEE RYISIYGNAG
YTYNGRYNLT GSVRVDNSNL FGTDPRYRYL PLWSVGASWR ITEENFMKDI NWLNSLSIRS
TYGLGGNVAR TVGPFLQARS TFFAEANATA TDIIYPPNKS LRWEKTATTN LGIDFAVLNN
RISGSMDYYV RNTTDLLGEK TIDPTNAFPN ALINYGSLNN KGFELALNTR NIAGKKFSWN
STLALSFNKN RMTEINTKDE TVYTLTGGYG VNKIGYPMDA VFSFRSAGLD PTNGSMLVYD
ADGKIVQNYD QSGTIVANMT NVKGLVYSGT LRPIYTAGLT NSFTYKQLSL SVMIISNGGN
VIRDVVPTIQ TNFPLRNTDQ RVANFWRKPG DEKIPGIMPA PDLKGDGGSY YTLLSYASDR
NVLKGDYVKV RDIAVTYNFE RLLSRIRKLA AAKLTLQVQN PFSWHANDAG IDPEAYEHAS
QYANRLLPVM PVYSAGIDIT F
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