Gene Cpin_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2928 
Symbol 
ID8359090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3606360 
End bp3606929 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content49% 
IMG OID644965109 
ProductNUDIX hydrolase 
Protein accessionYP_003122608 
Protein GI256421955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGC AACAGAACCC CTGGACGATT TTGTCCAGCG AGAAGAAATA CGATAATCCC 
TGGATAAAAG TGACAGAACA CCAGGTGATC AACCCTTCCG GGGGTAATGG CATCTATGGC
GTGGTACACT TTAAGAACGC CGCAATCGGC GTGGTGGCCC TGGATGAACA CAATAATATA
TACCTGGTAG GGCAGTATCG CTTCCCACTT GAACAATTCA GCTGGGAGAT TCCCGAAGGC
GGTGGGCCAT TAGGCATAGA TCCGTTATTG GGAGCTCAGC GGGAATTGCT GGAAGAAACG
GGTCTGGTAG CTGCAGACTG GCAACCCATT GTCCACATGC ACCTGTCCAA TTCAGTCTCA
GATGAAGCGG CTGTGATATT TCTGGCCCGT AACCTGGAAC AGCGCGAGGC AGAACCAGAA
GAAACTGAAC AATTGTTCAC TAAGAAAGTG CCTTTTGAGA CCGCTTATCA GATGGTGAAA
AACCATGAAA TCACTGATTC CATGTCTGTT GCCGCCATTC TGAAGCTAAA ACTGATGATG
TTGGAAGGCG AGATTCAGTC AGCCTTGTAG
 
Protein sequence
MEMQQNPWTI LSSEKKYDNP WIKVTEHQVI NPSGGNGIYG VVHFKNAAIG VVALDEHNNI 
YLVGQYRFPL EQFSWEIPEG GGPLGIDPLL GAQRELLEET GLVAADWQPI VHMHLSNSVS
DEAAVIFLAR NLEQREAEPE ETEQLFTKKV PFETAYQMVK NHEITDSMSV AAILKLKLMM
LEGEIQSAL