| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2916 |
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| Symbol | |
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| ID | 8359078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3593963 |
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| End bp | 3594895 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965097 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_003122596 |
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| Protein GI | 256421943 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.500367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACT TAGCCATCCC CGTAATTTTC TTTTGCCTGG CAGCATGTTC CGGCAAGGAA
ACAGAAGCTG ACGCACAGGG CAATTTTGAA GCGGATGAAG TAATCGTCTC TGCGCAGCAG
AACGGACAAT TGTTGTCCTT TACCGCGAAA GAAGGGGATA CACTTGCAAA AGGCGCTATC
GTCGGACAAA TAGACGTTAA CGGACTCACA CTCCAGAAAG AACAGACAGA AGCCACTATC
AGCGCACTCA GGGAAAAGAC GACGGATCCT CAGCCACAAC TGGCGCTTGT ACGTAAACAA
CTCGCTATAC AGGAAGCACA GCTGAAACAA CTGCTGCATG AACAGAAACG TACAGAGAAC
CTGGTAAAAG AAGATGCCGC TACGCCTAAA CAACTGGATG ATATGAACGC CTCTATCGAC
CAGATGCAGA AACAGATACT GGCTACCCGT CAGCAACTCA CCGTCAGCGA AACCAATGTC
GCAAACCAGA ACAGAAGCGT CCTGAGTGAA AAAGGCCCGT TGCAGAAATC ACTGGCCAGA
TATGATGATG AAATCGGGAA AGGGGTAGTG GCCAATCCCG TAAAAGGCAC CGTACTCGCC
CGCTATGCAC TGCAGGGGGA AATGGCCGTG ATAGGAAAGG CATTGTATAA GATCGCTGAT
ACTGACACAC TGTTGTTGAA AGCTTATATC ACAGGTACAC AACTGCCTGC AATCAAACTG
GGACAACACG TAAAAGTACT GATCGATGCC GGTGAAAAGG AATACAAGTC TTACCCGGGT
GTCATCTCTT ACATCTCCAG CAAATCAGAA TTTACGCCAA AGACCATCCA GACAAAAGAA
GAACGCGCGA ACCTCGTCTA TGCAATCAAA GTACGCGTTC CGAATGACGG ATATCTGAAA
ATAGGCATGT TTGCGCTCAC TCAATTCCAT TAA
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| Protein sequence | MKYLAIPVIF FCLAACSGKE TEADAQGNFE ADEVIVSAQQ NGQLLSFTAK EGDTLAKGAI
VGQIDVNGLT LQKEQTEATI SALREKTTDP QPQLALVRKQ LAIQEAQLKQ LLHEQKRTEN
LVKEDAATPK QLDDMNASID QMQKQILATR QQLTVSETNV ANQNRSVLSE KGPLQKSLAR
YDDEIGKGVV ANPVKGTVLA RYALQGEMAV IGKALYKIAD TDTLLLKAYI TGTQLPAIKL
GQHVKVLIDA GEKEYKSYPG VISYISSKSE FTPKTIQTKE ERANLVYAIK VRVPNDGYLK
IGMFALTQFH
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