Gene Cpin_2914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2914 
Symbol 
ID8359076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3592039 
End bp3592647 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content44% 
IMG OID644965095 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003122594 
Protein GI256421941 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGG AAAAAAATAC AGAGGAACAG ATCATAGAAG CGGCCAGAAA GATCTTTGTA 
AAACGTGGAC TCGATGGAGC CCGTATGCAG GATATTGCAG ATGAAGCCGG TATCAACAAA
GCCATGTTGC ATTATTATTA TCGTAGTAAG GACAAACTGT TTGAGATCGT GTTCAACGAG
GCATTCTCTA AAGTAGTGAC GCCCCTGGGA CATATCCTGG AAGGGTCTAA ACCAATAGAG
GAGAAGATTA AAGAAGTGAT AAATCATTAT ATCACCGGTA TCTCCCAGGT GCCTTACCTC
CCGATATTTA TATTAAGCGA GGTCAATCAG CGCCCGGAGA TCATGATAAA AAGGCTCAAT
TCCCAGCCTT CGTTTGGCAG CGTCATGAAT TTCATGAGGG AAGTGATCGA AGCAGGTAAA
AATGGTAAAA TCAGGGAAGT CAGCCCCATT CAGCTCTTCC TGAACATCGT ATCACTATGT
ATATTCCCCT TCGTGGCCCG GCCACTCGTA CAGGGGATCT TTCAGCAAGA CAACGTACAG
TTCGATCTGC TGATAGAAGA ACGGAAGAAA ATGGTGGCAG ATGTAATACT CGCCTGGTTA
AAGCCTTAA
 
Protein sequence
MAQEKNTEEQ IIEAARKIFV KRGLDGARMQ DIADEAGINK AMLHYYYRSK DKLFEIVFNE 
AFSKVVTPLG HILEGSKPIE EKIKEVINHY ITGISQVPYL PIFILSEVNQ RPEIMIKRLN
SQPSFGSVMN FMREVIEAGK NGKIREVSPI QLFLNIVSLC IFPFVARPLV QGIFQQDNVQ
FDLLIEERKK MVADVILAWL KP