Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2914 |
Symbol | |
ID | 8359076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3592039 |
End bp | 3592647 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644965095 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003122594 |
Protein GI | 256421941 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAGG AAAAAAATAC AGAGGAACAG ATCATAGAAG CGGCCAGAAA GATCTTTGTA AAACGTGGAC TCGATGGAGC CCGTATGCAG GATATTGCAG ATGAAGCCGG TATCAACAAA GCCATGTTGC ATTATTATTA TCGTAGTAAG GACAAACTGT TTGAGATCGT GTTCAACGAG GCATTCTCTA AAGTAGTGAC GCCCCTGGGA CATATCCTGG AAGGGTCTAA ACCAATAGAG GAGAAGATTA AAGAAGTGAT AAATCATTAT ATCACCGGTA TCTCCCAGGT GCCTTACCTC CCGATATTTA TATTAAGCGA GGTCAATCAG CGCCCGGAGA TCATGATAAA AAGGCTCAAT TCCCAGCCTT CGTTTGGCAG CGTCATGAAT TTCATGAGGG AAGTGATCGA AGCAGGTAAA AATGGTAAAA TCAGGGAAGT CAGCCCCATT CAGCTCTTCC TGAACATCGT ATCACTATGT ATATTCCCCT TCGTGGCCCG GCCACTCGTA CAGGGGATCT TTCAGCAAGA CAACGTACAG TTCGATCTGC TGATAGAAGA ACGGAAGAAA ATGGTGGCAG ATGTAATACT CGCCTGGTTA AAGCCTTAA
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Protein sequence | MAQEKNTEEQ IIEAARKIFV KRGLDGARMQ DIADEAGINK AMLHYYYRSK DKLFEIVFNE AFSKVVTPLG HILEGSKPIE EKIKEVINHY ITGISQVPYL PIFILSEVNQ RPEIMIKRLN SQPSFGSVMN FMREVIEAGK NGKIREVSPI QLFLNIVSLC IFPFVARPLV QGIFQQDNVQ FDLLIEERKK MVADVILAWL KP
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