Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2911 |
Symbol | |
ID | 8359073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3589435 |
End bp | 3590091 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644965092 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003122591 |
Protein GI | 256421938 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.233066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAA CATCAGGATT CAGTCCTGAG CAACAACTTA CTTCGCTGGA CGCAAGACTC TTGCTGTCAT TACAGCGGTT GAGTGATATG CTCAAGGCAA TGCAGTGGGA GCAGGCGAGA ATGCTGGGCA TAACGCCCTT ACAATTACAG ATATTATTAT TTACAGGTCA TCATACCGTC GAAGTGAACA AAGTGGCCTA TATCGCTACG GAGTTACAAC TGAGTCGTCC CACAGTAAGT GATGCAGCTG CAGCACTTGT CAGCAAAGGA TTTCTGCGGA TGGAAGAAGA TATGCGTGAC AGACGTAGCT ATTCATTCCT GCTTACCGAT ACAGGCAGAG ACGTGCTGAC ACAGGCAGAA CAGTATATCG CCGAACTGGA TACCATATTG CAGAAAAGAC CCTTACAGGA GAAAAGCAGT TTGTACCAGT CCGTTTATAC CATCATCGCC GGCCTGTATG ATAAAGACAA AGGTGGTATG CAACGTATGT GTTATAGTTG CGCACACTAT GAAGGCAACA AAAAAAGGCA GCACTACTGC CGCCTCTTTA AGAAAAAGTT GTTATCCGCA GAATTACAGA TTGACTGTAT AGATCATTCC AGCTTGTCAG GGCCAGCCAG AGTCATATCA TCATCCGATA ATAAAGGATC ATTATAA
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Protein sequence | MKKTSGFSPE QQLTSLDARL LLSLQRLSDM LKAMQWEQAR MLGITPLQLQ ILLFTGHHTV EVNKVAYIAT ELQLSRPTVS DAAAALVSKG FLRMEEDMRD RRSYSFLLTD TGRDVLTQAE QYIAELDTIL QKRPLQEKSS LYQSVYTIIA GLYDKDKGGM QRMCYSCAHY EGNKKRQHYC RLFKKKLLSA ELQIDCIDHS SLSGPARVIS SSDNKGSL
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