Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2871 |
Symbol | |
ID | 8359032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3550372 |
End bp | 3550725 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644965051 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003122551 |
Protein GI | 256421898 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.351583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTGCA GGAATGCTCA AGGAGAAGAA CACAAAAGAG AAATGATGGC GGTGCAGGAT TCAATGGATG TACTGAACGG GAAATGGAAA ATTCCTATCA TTTCATCCAT CTGTTATTAT AAACAAAGAC GATTCTCCGA CGTTTTGAAT GATGTAGACG GTATATCAAA CAAAATGCTG AGTAAGGAAT TAAAGGAACT GGAGGTTAAT AAACTGATCA GGCGGATCGT TCTGGATACG CAACCTGTAA CGGTGCTGTA TGAACTTACG GAACATGGTA AAACCTTGCA GACAATTATT AATAACCTGA CAGAATGGGG AATTAAGCAT AGGAAGGAAA TTGTGGGCAG GTAA
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Protein sequence | MECRNAQGEE HKREMMAVQD SMDVLNGKWK IPIISSICYY KQRRFSDVLN DVDGISNKML SKELKELEVN KLIRRIVLDT QPVTVLYELT EHGKTLQTII NNLTEWGIKH RKEIVGR
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