Gene Cpin_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2871 
Symbol 
ID8359032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3550372 
End bp3550725 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content40% 
IMG OID644965051 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003122551 
Protein GI256421898 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.351583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTGCA GGAATGCTCA AGGAGAAGAA CACAAAAGAG AAATGATGGC GGTGCAGGAT 
TCAATGGATG TACTGAACGG GAAATGGAAA ATTCCTATCA TTTCATCCAT CTGTTATTAT
AAACAAAGAC GATTCTCCGA CGTTTTGAAT GATGTAGACG GTATATCAAA CAAAATGCTG
AGTAAGGAAT TAAAGGAACT GGAGGTTAAT AAACTGATCA GGCGGATCGT TCTGGATACG
CAACCTGTAA CGGTGCTGTA TGAACTTACG GAACATGGTA AAACCTTGCA GACAATTATT
AATAACCTGA CAGAATGGGG AATTAAGCAT AGGAAGGAAA TTGTGGGCAG GTAA
 
Protein sequence
MECRNAQGEE HKREMMAVQD SMDVLNGKWK IPIISSICYY KQRRFSDVLN DVDGISNKML 
SKELKELEVN KLIRRIVLDT QPVTVLYELT EHGKTLQTII NNLTEWGIKH RKEIVGR