Gene Cpin_2870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2870 
Symbol 
ID8359031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3550009 
End bp3550368 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content39% 
IMG OID644965050 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003122550 
Protein GI256421897 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.368804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTAA TTAACCAGCT GTCAAAGGAA ACAGGTATCC CGATTGGTAC CATCCGCTTT 
TACGAGAAAT CAGGTCTTAT TAACGGGGAG ACGAAGCCTG AAGTAAAAAC CAACAAGTAT
GTGTATTATG GCGATGATGT TATCGACAAA CTGCGGTTTA TACAAATGGC GAAAGCCGTA
GGATTTACGT TGGGTGAGAT TAAAGAAGTG GTTGATGCAT GGTACCTGAA AAAGATCAGT
AAAAAAGCGC AGCTTGAAGT GTTGAATAAG AAGTTGGTGC AGATTGATGA GAAGATACAG
GAGTTGAATG AAATGAAAAA GCAGATAGCT GTTTGTAAGG ACAATATAGA GAAGCGTTAG
 
Protein sequence
MRLINQLSKE TGIPIGTIRF YEKSGLINGE TKPEVKTNKY VYYGDDVIDK LRFIQMAKAV 
GFTLGEIKEV VDAWYLKKIS KKAQLEVLNK KLVQIDEKIQ ELNEMKKQIA VCKDNIEKR