Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2870 |
Symbol | |
ID | 8359031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3550009 |
End bp | 3550368 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644965050 |
Product | transcriptional regulator, MerR family |
Protein accession | YP_003122550 |
Protein GI | 256421897 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.368804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGATTAA TTAACCAGCT GTCAAAGGAA ACAGGTATCC CGATTGGTAC CATCCGCTTT TACGAGAAAT CAGGTCTTAT TAACGGGGAG ACGAAGCCTG AAGTAAAAAC CAACAAGTAT GTGTATTATG GCGATGATGT TATCGACAAA CTGCGGTTTA TACAAATGGC GAAAGCCGTA GGATTTACGT TGGGTGAGAT TAAAGAAGTG GTTGATGCAT GGTACCTGAA AAAGATCAGT AAAAAAGCGC AGCTTGAAGT GTTGAATAAG AAGTTGGTGC AGATTGATGA GAAGATACAG GAGTTGAATG AAATGAAAAA GCAGATAGCT GTTTGTAAGG ACAATATAGA GAAGCGTTAG
|
Protein sequence | MRLINQLSKE TGIPIGTIRF YEKSGLINGE TKPEVKTNKY VYYGDDVIDK LRFIQMAKAV GFTLGEIKEV VDAWYLKKIS KKAQLEVLNK KLVQIDEKIQ ELNEMKKQIA VCKDNIEKR
|
| |