Gene Cpin_2868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2868 
Symbol 
ID8359029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3548484 
End bp3548999 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content47% 
IMG OID644965048 
Productprotein of unknown function UPF0153 
Protein accessionYP_003122548 
Protein GI256421895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.557479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAA ATCTCGCCGA AATTGCGGCC ATCGCACAGC AAAAGGAAGC TGAAAATCAG 
TCGTTTAAAG CGTATTTAAA ATCTCAGCCA GCTGATGATA TAGATCAACT TGTGCAGGAA
CTCGATGCAC TTGTTACACC TCAGGTCGAT TGTACGGCCT GTGGTAACTG CTGCCGTTCT
CTCATGATTA ATGTGGAACC TGATGAAGTC ACCCGGCTGG CGGCACACCT CAGCCGGACG
GAAGCGGATG TAATAGACAG TTATATAGAA ACGGGGGTTA ATAACAGCAT GATGGTGATT
AACCGGATCC CTTGTCATTT CCTCGAAAAT AGCATGTGTA CGATCTATGA GCACCGGTTT
GCAGGTTGCC GGGAGTTCCC CGGACTGCAC CTGCCACAAT TCACCAACAG GCTATTTTCC
ATGATGATGC ATTATGGCAC CTGCCCGATT ATTTTCAATG TACTGGAGGA AATGAAGGTA
AGACTGGACT TTAGCGCTGA TATGCCCGTT ACTTGA
 
Protein sequence
MNANLAEIAA IAQQKEAENQ SFKAYLKSQP ADDIDQLVQE LDALVTPQVD CTACGNCCRS 
LMINVEPDEV TRLAAHLSRT EADVIDSYIE TGVNNSMMVI NRIPCHFLEN SMCTIYEHRF
AGCREFPGLH LPQFTNRLFS MMMHYGTCPI IFNVLEEMKV RLDFSADMPV T