| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2862 |
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| Symbol | |
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| ID | 8359023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3541657 |
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| End bp | 3543930 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965042 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003122542 |
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| Protein GI | 256421889 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.18832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA TAATCATTCT CAGCATATTC ATGTTGACTT ACGGCATATC TGCTGTCGTA
GGTCAACAAC TGGATACGGC GCTGTATAAA AACAAGAAAG CCCCGATATC TGCACGTGTG
GAAGATCTGC TGAAACGCAT GACCCTACGG GAAAAGGTAT TGCAGTTGCA AAACAGGGGA
GCCGGAAAGA CTGATGAAAT AGCGAATATT TTTAAAGGAG AGAGTTTCGG TTGTACACAT
GAAATGAGTA TGAATGCGCA GGAGTGCGCA GAGATGTACC AGCAACTCCA GACTTACATG
TTGAAAAAAA CACGGCTGGG CATTCCGGTA TTGACTGCTG TGGAAGGGAT CGAAGGGATT
CTGCAAAACA ATTGTACCCT CTTTCCGCAT GAACTGGCGC AGGGCAGTAC GTTTAATCCT
GCACTGATCA GGAAGATGAC CACCGCTGCA GGAGAGGAGG CGCAGGTCAT TGGTATTCAT
CAGATACTTT CTCCTGTACT GGATATTGCG CGGGAACTTC GCTGGGGACG TGTGGAAGAA
ACTTTTGGGG AAGATCCATT CCTTATTGCT GAAATGGGAA CAGCCTTTAT TAAAGGGTAT
CAGTCCTTCA ATATCACCTG TACGCCTAAG CATTTTGTGG CACATGGTTC ACCTTCAGGA
GGACTGAACT GTGCTAATGT GAGTGGGGGA GAGCGGGATA TGAGAAGTTT GTACCTGTAT
CCTTTCAGAA AGGTGATCGC GAATACCAAT CCCTTATCTG TCATGTCCTG TTACAGCGCT
TATGATGGCG TAGCGGTAAG TGGTTCCCGC TATTACATGA CAGATATCTT ACGTGGAGAG
TTAGGTTTTA AAGGCTATGT TTATTCTGAC TGGGGATCAG TAGAACGTTT ACAGAGCTTT
CATCATATGG TAGATTCCCG TGAACAGGCC GCTATTCAAT CATTGATCGC AGGTATTGAT
CTGGATGTGG ACGGAGCTTA TGAGGGTACA TTGGAAAAAT CAGTAGAAAG TGGTCTGGTG
GACATCAGGT ATCTCGATGA GGCAGTTCGC CATGTACTTG CGGTTAAATT TGAACTGGGA
CTGTTTGAGA ATCCCTTTGG CGATCCGGCC AGGGTGAGTA AGGTAGTGCG CAGTGCGGCA
CACGTCGAAA TAGCCAAACT GGTGGCCGAT GAAAGCGCCA TTCTGCTCAA GAATGAAAAT
AACATTCTCC CGCTGGATGT AGCAAAGTAT AAGTCGATCG CCGTGCTTGG CCCTAATGCA
GATCAGACCG TTTTTGGTGA TTATTCCTGG ACCAGTCGTA ATACCAAAGA AGGGACTACC
TTATTAGAAG GTCTGACAGC AGCGATTGGC AATAAGGTAC AACTGCACTA TACACAGGGT
TGCGACTGGT GGAGTAAGGA TACGACAGGT ATAGCAGCTG CAGTAAAAAA TGTAATGGCG
AGTGACCTGA CCATTGTAGC TATAGGAACG CGTAGTACTT TTCTGGGAAG GAGTCCGCAA
TATTCTACTG CGGGAGAAGG CTTTGATCTC AGTTCACTGG AATTACCAGG TGTACAGCAG
GAACTGCTGA CAGCCATTAA AGCAACAGGC AAACCATTTA TCGTTATATT TATCGCAGGT
AAACCACTGG CTATGCCATG GGTAAAGGAA AATGCTAATG CTCTGCTGGT ACAATGGTAT
GGCGGCGAAA AACAAGGTAA TACACTGGCC GATATACTGA CAGGGGCGGT GAATCCCTCC
GGAAGGCTGA ACGTCTCTTT CCCACGTAGT ACCGGCAATA CGCCGATCTA TTACAACCAT
TTTATAACAG ATCGTAATGA ACCTTTCGAC CGACCTGGTA GTCCGGAAGA GCCTAAAGGC
CATTATATCT TTGATCGTCC GGATCCGCTC TGGGCATTTG GGACAGGAAT GAGTTTCACA
ACTTTTCAAT ACCTGGATTG CAGAATAGCA GACACTATAT TGACGGAAAA AGACGTTATC
AAAATTGCCG TCGATGTAAA AAACACCGGC AACAGGGATG GAAAGGAAGT AGTACAGGTA
TATGTGCGTG ATAAGGTGAG TTCAGTTGCA ACACCTGTAC AGCAGTTAAA GGCATTCAGC
AAGGAATTGA TCAGGAAAGG AGAAACCCGG ACAGTACAGT TGGAAATACC GGTTTCAGAG
CTGGGTTTGT ACGATGAAAA GATGAATTAT GTTGTAGAAC CAGGTGCATT TGAATTACAG
ATAGGTGCTG CCGCTGATAA CATTCACTTT ACAAAAGTGA TCCAGGTAAA GTGA
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| Protein sequence | MKQIIILSIF MLTYGISAVV GQQLDTALYK NKKAPISARV EDLLKRMTLR EKVLQLQNRG
AGKTDEIANI FKGESFGCTH EMSMNAQECA EMYQQLQTYM LKKTRLGIPV LTAVEGIEGI
LQNNCTLFPH ELAQGSTFNP ALIRKMTTAA GEEAQVIGIH QILSPVLDIA RELRWGRVEE
TFGEDPFLIA EMGTAFIKGY QSFNITCTPK HFVAHGSPSG GLNCANVSGG ERDMRSLYLY
PFRKVIANTN PLSVMSCYSA YDGVAVSGSR YYMTDILRGE LGFKGYVYSD WGSVERLQSF
HHMVDSREQA AIQSLIAGID LDVDGAYEGT LEKSVESGLV DIRYLDEAVR HVLAVKFELG
LFENPFGDPA RVSKVVRSAA HVEIAKLVAD ESAILLKNEN NILPLDVAKY KSIAVLGPNA
DQTVFGDYSW TSRNTKEGTT LLEGLTAAIG NKVQLHYTQG CDWWSKDTTG IAAAVKNVMA
SDLTIVAIGT RSTFLGRSPQ YSTAGEGFDL SSLELPGVQQ ELLTAIKATG KPFIVIFIAG
KPLAMPWVKE NANALLVQWY GGEKQGNTLA DILTGAVNPS GRLNVSFPRS TGNTPIYYNH
FITDRNEPFD RPGSPEEPKG HYIFDRPDPL WAFGTGMSFT TFQYLDCRIA DTILTEKDVI
KIAVDVKNTG NRDGKEVVQV YVRDKVSSVA TPVQQLKAFS KELIRKGETR TVQLEIPVSE
LGLYDEKMNY VVEPGAFELQ IGAAADNIHF TKVIQVK
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