| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2853 |
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| Symbol | |
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| ID | 8359014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3523064 |
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| End bp | 3525442 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644965033 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003122533 |
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| Protein GI | 256421880 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0317184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGCA ACTTCTTTAG GATAGTCTGC CGGAATATGA TCCGCAATAA AAGCTTTTCC
ATTATCAATA TTACGGGTTT AGCCATCGGC ATGTCAGCTA CCATACTCAT CCTGCTCTGG
ATACAGAATG AGGTCAGCTA TGACCAGTTC CATGAGAAGA GAAACAGGAT ATACGAAGTA
TGGAACAGGG TATCCGTAGA AGGGAACACG TCCTGCTGGA ATACGGTGTC TGACCCGGTT
GGCCCTGCGC TGGAAAAAGA TCTGCCGGAA GTGGAGCGTG TGGTCAGGGT CAATCATAAT
AATTCACAAC TGTTATCCCA CGGGGAGACC AGAATAATGA GGTCCGGAAA TATTGTTGAT
ACCGGGTTTC TGCAGCTATT CAGTTTTCCG ATGCTGGAAG GTAATCCGAC AACGGCTTTG
AATGATGTAC ACGGGGTGGT TGTTACACAA AGCACAGCGA AGAGTTTGTT CAATCAGGAA
GACGCGTTGG GGAAAATTAT AAAGATCGGA GAACTGGGTA ATTTTACCAT TACCGGTATA
CTCAAAGATC TTCCTAATAA CACCCGGTTT GATTTTGATT TCCTGTTGCC CAGGAGCAAT
CTGAAAAATG GGGAAGGGCA TGATCTGGGT TGGAATGATA ACAGTACACC CACTTTTGTT
CTGTTAAAAC CGAATGCAAG TTATGCAGCG GCATCACTGA AGGCGAGAGA TCTGAAACAG
CATTACAGCG ACGACGCCAA AACACTGAAA TGGCAGCTGT TCCTTTATCC GCTGGATCGC
TGGCGTTTAT ATTCAAGTTT CACCAATGGG GTAGAAGATA ATGGCGGCCG TGGTACTTTT
GTTAAACTGT TTGGCATCAT TGCCGCATTT ATACTGGTAA TTGCGTGTAT CAATTTCATG
AACCTCAGTA CAGCGCGGAG TGAAAAAAGG GCAAAAGAGG TAGGAATAAG AAAAGTGATA
GGCGCACAGA AGTCATCCCT GATCGGTCAT TTTATCGGAG AGTCTATCTG TCTTGCTTTC
CTGGCCGGTA TCATAGCGCT GTTTATTGTT CAGCTATGTT TACCTGCCTA TAACCAGTTG
ACCGACAAAC AGTTGTTTAT CGACTTTACC AATGCCTATG CAATACTGGC ATTTATCGGG
TTTATATTAT TCACTGGTTT ATTGGCGGGT AGTTACCCTG CATTTTACCT GTCTTCATTT
CAACCTATTA AGGTATTGAA AGGCACCTTC AGGAGCGCGA ATGCAGTATT AACTCCCCGG
AAATTGCTGG TGGTGGTACA ATTCACATTT TCCACCATCC TGATTATCTG CACGATTATC
GTCAAGCAAC AAATAGACTA TGCGCGTAGC CGGAATGCAG GTTATAACAA GGAACATCTC
GTGTACCAGT TTATGACGGG AGATATACCT AAGAATTATG CCCTGATTAA AAACGAATTG
CTGGCATCAG GAGTCGCCAG TTCTGTTACA AAAACCAACT CTCCGCTTAC AGAACGATGG
AGCAATGGGT GGGGACAGAA CTGGGAAGGG AAAGACCCTA ATGATAAAAC TTCTTTCGAC
CGGTATTTAT CCGATGAAGG ATTGGGAACT ACCGCAGGAC TGCAATTTGT ACAGGGACGT
GATTTTGATC TGCAGAAATA TCCGACCGAC TCAACAGGTC TGATTATAAA TGAATCGGCA
TTAAAGATCA TGCAATTTAA AGACCCGATC GGTAAGACAG TAGATGATCT GGATATACGG
TGGCATATTG TAGGAGTGAT CAAGGATTTC ATTCTGACCA GTCCTTATGA ACCCACCAGA
CCCATACTGA TATGCGGTGC GAAAAGCAGT TTTATGAGTT TCCGCGTGAT GCAGATCAAG
CTGAATAAGG ATATTGCTAT AGCAGAAAAC CTGCGGAAGG CGGAAACCAT ATTTAAGAAA
TACAATCCTG AATATGCGTT TGATCCGAGA ATGGTTGACC AGGAATATGC GCGGAAGTTT
GAAAACGAAA AACGCCAGAG TATACTGGCT GGTTTGTTCG GAGGGCTGAC TATTTTCATC
TCATGCCTCG GTTTATTTGG TCTGGCTACT TATATGGCGG AAAACAGGAT CAAGGAAATC
GGCGTACGAA AAGTATTGGG CGCCTCCGTG CTCAGTATCA CAGGGTTATT GTCAAAAGAT
TTTGTGAAAC TGGTAACCAT CTCATTTTTT GTGGCAGCAC CTGTCGCCTG GTGGAGCATG
GATCAGTGGC TGCAAAGTTA TTCTTACCGG GTAGGTATAC AGTGGTGGGT GTTTGTAGTG
GCCGGACTAT TATCGGTAAC AATTGCTTTG CTGACAGTGA GTTATCAGTC TGTAAAGGCG
GCAATAGCAG ACCCGGTTAA AAGCCTGAGA GCTGAATAG
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| Protein sequence | MISNFFRIVC RNMIRNKSFS IINITGLAIG MSATILILLW IQNEVSYDQF HEKRNRIYEV
WNRVSVEGNT SCWNTVSDPV GPALEKDLPE VERVVRVNHN NSQLLSHGET RIMRSGNIVD
TGFLQLFSFP MLEGNPTTAL NDVHGVVVTQ STAKSLFNQE DALGKIIKIG ELGNFTITGI
LKDLPNNTRF DFDFLLPRSN LKNGEGHDLG WNDNSTPTFV LLKPNASYAA ASLKARDLKQ
HYSDDAKTLK WQLFLYPLDR WRLYSSFTNG VEDNGGRGTF VKLFGIIAAF ILVIACINFM
NLSTARSEKR AKEVGIRKVI GAQKSSLIGH FIGESICLAF LAGIIALFIV QLCLPAYNQL
TDKQLFIDFT NAYAILAFIG FILFTGLLAG SYPAFYLSSF QPIKVLKGTF RSANAVLTPR
KLLVVVQFTF STILIICTII VKQQIDYARS RNAGYNKEHL VYQFMTGDIP KNYALIKNEL
LASGVASSVT KTNSPLTERW SNGWGQNWEG KDPNDKTSFD RYLSDEGLGT TAGLQFVQGR
DFDLQKYPTD STGLIINESA LKIMQFKDPI GKTVDDLDIR WHIVGVIKDF ILTSPYEPTR
PILICGAKSS FMSFRVMQIK LNKDIAIAEN LRKAETIFKK YNPEYAFDPR MVDQEYARKF
ENEKRQSILA GLFGGLTIFI SCLGLFGLAT YMAENRIKEI GVRKVLGASV LSITGLLSKD
FVKLVTISFF VAAPVAWWSM DQWLQSYSYR VGIQWWVFVV AGLLSVTIAL LTVSYQSVKA
AIADPVKSLR AE
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