| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2820 |
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| Symbol | |
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| ID | 8358981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3473850 |
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| End bp | 3477023 |
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| Gene Length | 3174 bp |
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| Protein Length | 1057 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965000 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003122500 |
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| Protein GI | 256421847 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.195725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC GTAATTCCAC GTGTGTACTG CTATGTATTG CAGTCATCCT AAGCATTATT
CCTTTATTGC TGCATGCCCA GCAAAGCCGC TCCGATGTAT CGGGTATTGT AAAAAGCGAA
GAAAACGGCG AACCGCTCTG GGGTGTCAGT GTCACCGTCA AAAATGCAAC AAACAGTTTT
ACCGCTTCTG TACAAACCGA CAGCGCCGGC TATTTCACCT TCACCAGATT GCCGGCAGGT
CCGGGGTATA CTTTCTCTTT TTCCTTTATG GGATATGAGC GACAAACCCT GTCAGGCTAT
AACCTGAAAG CAGGCGCTGA ATTCTCTTTA CGGGTGGATC TTAAAAACAG CGAACAGAAG
ATAAATGAAG TCGTGGTAGT AGGATATGGC TCCATGCAGA AAAAAGACCT TACCGGCTCT
ATCAGTCAGC TGAAAACAGC CCGCCTGGAA AAGGAGAGTC CCCGCTCTAT ACAGGACCTG
CTGCGTAGCG GTGTGCCTGG ATTGTACGTC GGACAAAATA CTTCCGCAAA GGGTGGGGGA
GACATGCTGG TACGCGGACA ACGTTCCCTG AAAGCAAGTA ATGATCCGCT GATCGTACTG
GATGGCGTGA TCTTCTTCGG GGAATTATCT GAGATCAATC CACAGGATAT CGAACACTTT
GATATCTTGA AAGATGCCTC CGCCGCCGCT ATATACGGGG CTAAATCAGC CAATGGAGTG
GTCATCATTA CAACGAAAAA AGGTACTTCC GATAAACCTA CTATCCGCTT TGACGCCAAC
AGAGGTGTTG CTGCCATGGG TAAAAAACGC GAGGTATATG ATGCGGAGGG ATATCTGAAA
TTCCGCTCCG ACCTCTTTAA TAGTGGTACA AGATGGGCTA CGCCTGCTAA ATATGTAAAT
CCTACACCAG AGAATCTTAA TAAATATGGC GTCTCCCTGG ACGACTGGTT AGCTTACGAT
GCGCTGACCG GAACGCCTGA AGAGATCTGG TTGCTGCGTA TCGGTCTTTT TGAAAAAGAA
AGGCTTAATT ATTCAAAAGG CAGAACCTAT GACTGGTTTG ACGGCTCCTT CCAGCATGGT
GTACAGCAGA ACTATAATGT AAGTCTGTCA GGCAGAAATA AAGACGCCCT CAATTACTAT
ATCTCCATGG GATACCTCAA TAATGAAGGT ATCGTGGTGG GTGATAAATA CCGTGCATAC
CGGTCGAATA TCAAACTGGA CGGAAAGGTG AATAAATGGA TGCACACCGG CGTAAATATC
AATTTCCAGG ATAGATCAGA TGGTAATCTG GCTGCGGACT GGGAAGGACA GATTATTAAT
AACTCTCCCT ATGCCTCTCC GCTGGATTCA AATGGCATCC TTGACGGACA GCCCATGGGC
GCCAGTGTAA ACCAGGGTGT CAATACAGCT TATGGTAATC AGTTCAAGCA ACTGGAGAAA
GGATTTACGG TGTTAAATAC CACCATTTAC CAGACGATCA AACTGCCATT CAACATTACC
TATCAGCTGA ATTTCTCCCC AAGAATGCAG TGGTTCTATA ACAGGTATCA TGAATCCTCG
CAGAACCCAT TATGGTCTGA TAACGGAAAA GTAATCAGGG AAAACACCAA AAACTTTGAC
TGGCAGATCG ATAACATCAT TTCATGGGAT TATACCTTCG CCCGTAAACA TAAAGTGAAA
GTGACCCTGC TTCAGAACGC AGAAGAACAC CGTTCCTGGA ATGAAAGTAT TACTGCCAGG
GATTTTTCTC CTACAGATGC CCTGGGTTTC CATAATATCG GTGCTGCCAA TCCTTTAAAG
ACGACTGTCA GCAGTAATGA CCAGCATAGT ACCGGTGATG CGTTAATGGC CCGCCTGTTC
TATTCCTATG ATAACAGGTA TATGATCACG GCTTCTGTAC GCCGGGATGG TTACTCTGCA
TTTGGCGCTT CCAATCCAAG AGCCACTTTC CCGGCCCTCG CTTTTGCCTG GAACTTTGCA
GATGAACGTT TCTTCCACTG GTCGCCTATG AGTACCGGTA AACTGCGTTT GTCATGGGGT
ATGAACGGTA ACCGCTCCAT CGGTATATAC CAGGCATTGT CTAATCTGAC CACCGGTGCA
GGCCGTTATC CTTATGTGCA ATCGAATGGC ACGGTGTATG AATTGTCTCA GTTGTACGTT
GACCGTATGG CCAACTATGG TCTGAAATGG GAAGCTACTT CCTCCTGGAA TGCCGGTCTG
GATTTCGGAT TCCTCAATAA CAGGATTACC GGTAATATGG AAGTTTACTA TATGCCTACC
ACCGATCTCC TGATGGATCA GTCCCTGCCT GATTTTACCG GTTTCAGTAC CGTAACGACC
AATCTCGGGG AAGTGGTGAA CAGAGGCTTT GAATTAGGAA TCACTTCTCA GAACATACAG
AAAAAGAACT TTGAATGGAG TACCACATTT GGCTTCTTCT TTAATAGAAA TAAGGTGAAG
CACCTCTACT ATACCTATGA AGACGTATTA AATGCAGATG GTAAATTAGT CGGCTCCAAA
GAGATTGACG ATATCTCTAA CGGATGGTTT ATCGGTCACG ATCTGTCCTC AATATGGACC
TATAATGTAC AGGGAATCTG GCAGGAAAAT GAAAGAGAAC AGGCGGCTAA ATATGGAGAG
ATCCCCGGGG ATGTGAAAGT GGAAGATGTG GATGGAGATG GAAAATATAC CAATGCCGAT
AAGAAGTTTT TGGGTACGAC CACACCACGC TTCCGCTGGA CGCTGCGCAA TGACTTTGCT
ATCTTCAAAA ACTTTGATTT CTCTTTTAAT ATCTATGCGA ACTGGGGACA TAAGGCGACT
TCCACCGATT ATCTGAATAA CTTCGGTTCG CAGACGGACA GGATCAATTC TTATGTGAGA
AAATACTGGA CGCCTGAAAA TCCTTCTGAT ACTTACGCCA GACTGAATTC CACCAATGTG
CAGAACATCA CGCCTTCCCG TGTGATTGAT AAAACATATA TCCGCCTTGA TAACATATCG
GTGTCTTATT CGCTGCCTCC TGATGTAGCC AGGAGAATGG ATATGGCCCA GCTCAAGGTA
TATGCAGGTG TACGCAACGT AGCGGTATGG GCGAAAGACT GGGAATACTG GGATCCGGAA
ACCACTTCAT TAATGCCCCG GTATTATACA GTCGGAATTA CAGCCTCATT TTAA
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| Protein sequence | MKQRNSTCVL LCIAVILSII PLLLHAQQSR SDVSGIVKSE ENGEPLWGVS VTVKNATNSF
TASVQTDSAG YFTFTRLPAG PGYTFSFSFM GYERQTLSGY NLKAGAEFSL RVDLKNSEQK
INEVVVVGYG SMQKKDLTGS ISQLKTARLE KESPRSIQDL LRSGVPGLYV GQNTSAKGGG
DMLVRGQRSL KASNDPLIVL DGVIFFGELS EINPQDIEHF DILKDASAAA IYGAKSANGV
VIITTKKGTS DKPTIRFDAN RGVAAMGKKR EVYDAEGYLK FRSDLFNSGT RWATPAKYVN
PTPENLNKYG VSLDDWLAYD ALTGTPEEIW LLRIGLFEKE RLNYSKGRTY DWFDGSFQHG
VQQNYNVSLS GRNKDALNYY ISMGYLNNEG IVVGDKYRAY RSNIKLDGKV NKWMHTGVNI
NFQDRSDGNL AADWEGQIIN NSPYASPLDS NGILDGQPMG ASVNQGVNTA YGNQFKQLEK
GFTVLNTTIY QTIKLPFNIT YQLNFSPRMQ WFYNRYHESS QNPLWSDNGK VIRENTKNFD
WQIDNIISWD YTFARKHKVK VTLLQNAEEH RSWNESITAR DFSPTDALGF HNIGAANPLK
TTVSSNDQHS TGDALMARLF YSYDNRYMIT ASVRRDGYSA FGASNPRATF PALAFAWNFA
DERFFHWSPM STGKLRLSWG MNGNRSIGIY QALSNLTTGA GRYPYVQSNG TVYELSQLYV
DRMANYGLKW EATSSWNAGL DFGFLNNRIT GNMEVYYMPT TDLLMDQSLP DFTGFSTVTT
NLGEVVNRGF ELGITSQNIQ KKNFEWSTTF GFFFNRNKVK HLYYTYEDVL NADGKLVGSK
EIDDISNGWF IGHDLSSIWT YNVQGIWQEN EREQAAKYGE IPGDVKVEDV DGDGKYTNAD
KKFLGTTTPR FRWTLRNDFA IFKNFDFSFN IYANWGHKAT STDYLNNFGS QTDRINSYVR
KYWTPENPSD TYARLNSTNV QNITPSRVID KTYIRLDNIS VSYSLPPDVA RRMDMAQLKV
YAGVRNVAVW AKDWEYWDPE TTSLMPRYYT VGITASF
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