| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2780 |
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| Symbol | |
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| ID | 8358941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3421331 |
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| End bp | 3423448 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644964960 |
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| Product | DNA mismatch repair protein MutS domain protein |
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| Protein accession | YP_003122460 |
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| Protein GI | 256421807 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00383732 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATATT TTCCCGATTC AGCACTGGTA CAGCTGGAAT TTGACAAGGT ACAGGCTTTG
TTAAAAGAGC ATTGTAAAAC GGAGCTGGGC AAACAAATGG CAGATGAACT GCGTTTGCAC
ACCCACATTG ATTATGTAAA AACGGCCCTG CAACAGGCCC ATGAATACAA GCAGCTGACT
TTGCTGCAGG AACACTTTCC CAACGATTAT GTACTGAACC TGAAAAATGA ACTGCGTTTG
CTGAGCATCC AGGGTGCTGT ACTGAGCGAA GAACAGATTA TGCAGTTGCG TAAGCTGGCG
GAAAGTATGC ACAGCATTGT ACGTTTCTTT GATCACGACA GGCGTGTCAC TTATGCAGGA
CTGTTCAGCG TGATTACTCA TACCCACTAT GAGAAGAAAA TCACCGCGCT CATCGACGAA
GTACTTGATG AGCATGGAGA AGTACGCGAC AACGCCACCC CTGAACTGGC TAAAATCCGT
ATGAACCTGT TCCGTAAAAG GAACGAACTA CGCCGCGCAT TTGAGCGCTG TCTTAGTAAA
CTTAGTAAAC TTGGCTACCT CGCCGATACG GAAGAAGCCT TCCTGAACGG AAGAAGGGTA
GTGGCGATCT ACGCCGAAAA CAAACGTATG GTGAAAGGTA TCCTCCACGG GGAGTCCGAT
ACCCGCCGTA CTGCTTTCGT CGAACCGGAA GAAACGATAG AACTGAACAA TGACGTGATG
TCCCTCGAAA GGGAAGAAAG TAAAGAGGTG TACAAAATAC TGCGTACACT GACCCACCAG
CTCAGTCAGC ACAGTCACCT GCTCAATAAC TATCACGAGA TACTCGGACA ATACGACTTT
ATCAGGGCAA AAGCCAAACT GGCGCTGGAC ATGGACGGTA ACTACCCCAT GCTGACGCCG
CACGCGGAAG CGCATCTCGT AGACGCGCAC CACCCGCTGC TGCTCCTGTA TAACCGCCGT
AACAAGAAAC CGACCATCCC GGTGAACCTG ACCCTGAACA AGGATAACCA TATCCTGGTG
ATCAGCGGTC CGAATGCCGG CGGTAAAACC GTGACCATGA AAACGGTCGG CCTGATCCAG
CTCATGCTGC AGGCAGGCCT GCTGGTGCCT GTACACCCCA GCTCACAACT CGGTATTTTC
CGTCAGCTGA TGATCCATAT CGGTGATACT CAGTCCCTGG AATTTGAACT GAGTACTTAT
AGTTCTCACC TGAAGAACAT GAAGTACTTC ATGGAGAACG CCAATGGTAA GACCATGTTC
TTCATCGATG AATTAGGTAG CGGTTCTGAC CCGAATCTCG GGGGCGCCTT CGCAGAGGTG
ATCATGGAAG AAATGGCCAA GAAACACGCT TTTGGTATCG TTACCACCCA CTACCTCAAC
CTGAAGGTAA TGGCCAATAA GGTACGTGGT ATCATCAACG GCGCTATGGG CTTCGACGAG
GAAAACCTGT CGCCTATGTA CAAACTGATC GTAGGTAAAC CAGGTAGCTC GTATACGTTC
TCTATCGCGC AGCGTATCGG TCTGCAGCCT GCCCTCATTG CCCGGGCCAA AAACCTGGTG
GACGAAGGGC ACTTCCAGCT GGATAAACTG CTCAACAAAG CAGAACAGGA TCTGCAGAAA
GTAGAAGCCA AGGAGAAAGA ACTGCAGAAA CTCCTGAAGG AGAATGAAAA GCTGAAACGT
GAATACGAGA TCCTGTCCGA TAAGGAAAGG AAAACCCAGC AATTCACTAC CCTGAAACTG
CAAAACCAGA TCAAGGAAGA AGAACTCCAG TACCTCAAGG ATATGGAGCG CAAGCTGAAA
CAGATTGTTT TTGAGTGGAA ACGTACAGAT GACAAACAGA AAGTCATGAA ACAGGCAGAA
GCCCTGTTAT TCCATAAACG CCAGAAACAG ATCAACGAAC GCTTCGAAAA GAAAATTCAG
GATAAATTCC TGGAGGTAGT AGGAGCCGAC CTGAAACTGG GCGACCAGGT AAAGATCAAG
AGCAATGGCC AGGTAGGAAA GCTGATGGAA GTCCGCGACA AACGCGGTAT CGTAAAACTC
GGCAATATTC CGATGAACGT GGCACTGTCT GACCTGGTAC TGGTGAAAGA GCGGCCGAAA
GAAGAAACGG CTAAGTAG
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| Protein sequence | MKYFPDSALV QLEFDKVQAL LKEHCKTELG KQMADELRLH THIDYVKTAL QQAHEYKQLT
LLQEHFPNDY VLNLKNELRL LSIQGAVLSE EQIMQLRKLA ESMHSIVRFF DHDRRVTYAG
LFSVITHTHY EKKITALIDE VLDEHGEVRD NATPELAKIR MNLFRKRNEL RRAFERCLSK
LSKLGYLADT EEAFLNGRRV VAIYAENKRM VKGILHGESD TRRTAFVEPE ETIELNNDVM
SLEREESKEV YKILRTLTHQ LSQHSHLLNN YHEILGQYDF IRAKAKLALD MDGNYPMLTP
HAEAHLVDAH HPLLLLYNRR NKKPTIPVNL TLNKDNHILV ISGPNAGGKT VTMKTVGLIQ
LMLQAGLLVP VHPSSQLGIF RQLMIHIGDT QSLEFELSTY SSHLKNMKYF MENANGKTMF
FIDELGSGSD PNLGGAFAEV IMEEMAKKHA FGIVTTHYLN LKVMANKVRG IINGAMGFDE
ENLSPMYKLI VGKPGSSYTF SIAQRIGLQP ALIARAKNLV DEGHFQLDKL LNKAEQDLQK
VEAKEKELQK LLKENEKLKR EYEILSDKER KTQQFTTLKL QNQIKEEELQ YLKDMERKLK
QIVFEWKRTD DKQKVMKQAE ALLFHKRQKQ INERFEKKIQ DKFLEVVGAD LKLGDQVKIK
SNGQVGKLME VRDKRGIVKL GNIPMNVALS DLVLVKERPK EETAK
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