Gene Cpin_2747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2747 
Symbol 
ID8358908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3370434 
End bp3370823 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content46% 
IMG OID644964927 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003122427 
Protein GI256421774 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.668985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAAT TTTCTACCAC ACCTCCTGAA AGCGAAGCAG CATGTAATGC CTCTCTTCAG 
GCCCTGGGTG ATGCCTTATA TGTTATCGGA GGAAAATGGA AACTCCGGAT CATCATCGCC
CTTTCCGAAG GACTCAAAAG ATTCAACGAA ATACAACGCA GAGTGGATGG TATATCAGCC
AGGGTATTAT CCAGCGAACT GAAAGATATG GAACTGAACG GCTTTATCAG CAGAACGGTC
CACCCTGGTA ATGCGAACCT GGTAGAATAT GAGCTGACTG AATACAGCGG TACCTTACAG
GACGTTGTCA GGTCGCTGAT AGACTGGGGA ACCATGCACA GAATAAATAT CAAAAACAGG
ATGAAACAGG TAGCCGAAAC AAGCTCTTAA
 
Protein sequence
MPKFSTTPPE SEAACNASLQ ALGDALYVIG GKWKLRIIIA LSEGLKRFNE IQRRVDGISA 
RVLSSELKDM ELNGFISRTV HPGNANLVEY ELTEYSGTLQ DVVRSLIDWG TMHRINIKNR
MKQVAETSS