| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2740 |
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| Symbol | |
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| ID | 8358901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3358921 |
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| End bp | 3361098 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644964920 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003122420 |
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| Protein GI | 256421767 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.1298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA CGATTCTACC CATATTTATA CTGATCAGCT TTACGCTTTC GGCAGCGGCA
CAGCAAAACC GCCCCGATAC CATGAAAGTA CAGCAGCTGA AAGATATTGT TGTAACCAGT
CGTCTGCCAC AGGTGGAACG CAGGAACGAT AAAGTGATCT TCAACGTACA AAATAGTATC
CTGGCCAGCG GCAGCACTGT ATGGGATGCA TTGCGTAAAG CGCCAGGCAT ACAGACCAAC
GAAAATGGTC AGGTAACACA GGGTACCAAG AGTATGACCG TGTATATAGA CGGCAAACAG
GTACAGATGA CCGGAGAAGA TCTTACCGCC TACCTCAGCG GATTACCAGC TGATAACGTC
TCCAGGATAG AGATCATGCG TACACCTTCT GCCAAATATG ATATTCAGGG TGGTGGTATT
GTCAACATCA TCACTAAAAA ATCGAAAGCA CAGGGTTTCA ATGGGACTAT CAATGGCGCC
TATACACAGG CTACATTCGG TAGCCAGACT GCCGGTGGTA CCTTCAATTA CAAACAAAAC
AAACTGAATA TCTATGGTAA CTATGGCTTT AGCAATAAAA GCATCAGACG CCAGATGAAT
ACCTATACCA TTTACCAGAC ACCTGACTCC TATTCTGACT GGCGTGGCAA ACGTACAATC
GATCCGGTGA ATAAAAGCCA TAGTTACCAG TTAGGGCTGG ATTATGATAT CAATCCCCGG
CAGGTGTTTG GTTTCCGGGT GACTGGTTTT AACTCCGACC GTAATACCGA CTCCAGGACC
ATCACCAATG TATTCAATGA CCATGTATCC GTGGCTGATT CTACCTTGAA CACCAATGTC
CGTTCAAATT CCGCCAGCAA CAACTACAGC TTTAACCTGA ATTACAAATT AAAACTGGAC
AGTGCCGGTA ATAGCCTCAA TATTGATGTT GACTATGTAC CTTACGCCAA CAATAGCCGG
CAGTATGTCA ACGCCCTTAC TTATATACAG GATAAAAACC TCAATAACAA TTTCAACATA
TTCACACCAT CGACACAACG TATTAATATA TGGTCAGGAA AAGCAGATCT GACTTATAAA
ATTGCCGGAA AATGGGCGAT GGAATCAGGG ATAAAATACA CCAGTATTGC CTCAGACAAC
CTCTTCCTAT ACAATAATGT GCTTGAAGGC GCCTTTTCCC CGGACGACGG TAAAAGTAAT
AACTTCAAAT ACACGGAGAA TACGGCTGCC GCTTACACCA GTATCAGCGG TACCCTTGGC
AAGTGGGACC TGCAGGCGGG ATTAAGAGGA GAACATACCC GTACTACCGG TAATTCCATT
ACACAACAAC TCATCACCCG TAGAAACTAC CTCCGCTTAT TCCCTACCCT CTTTATCACC
TATAAGGCAT CAGAGGATCA TGTGTTCAGT TTCAATTATA ACAGCCGCAT GGAACGTCCG
GCCTATATGC AATTGAACCC TGCCAGATCG TACAGCAGTC CTTACAGTTT CCAGCAGGGT
AATCCGGCGC TGCGACCTGC TATATTCCGA AGCGGTGAAC TGAGTTATAC CTTTAAACAA
AACTATACGC TGACTGCTTC CTATTCGAAA CTGCAAGACC TGGTCAGTAA TGTAACGGTA
CAGGATAACG TCAGCAAAAC ATTTTACGAC ACACAGCAGA ACCTTGATAA TATCGAAGAC
TATACCCTGG GCTTCATGAC AAACCTCCGG CCTACAGACT GGTGGGATAT GAATGTAACG
ATCGAAGGCG CTTACCGCAA ACAACATTCT ATGTACACAG ACGGTTATTT TTCTTCTGAC
GACTATATTC TTTACCTGAA CACTACCCAG TCATTTGTTC TCAGCAAAAA ACACGGTATA
AAAGCGGAAC TCTCCGGCAG ATATGAATCG CCTGTTTACC AGGGTGTATA TCATGTTGAC
AGGACTTCAG ATATCAGCCT GGGATTCAGC AAATCTATAT TAAAGCAACA GGGTACCGTT
AAACTCGCTT TTGCAGATAT ATTTTATAAG AATCCTTACA AGCTGGATAT CGCTTATCTG
CAACAACGCA ATGGTATGAT ACAAAAGAAT GATACAAGGA ATGTATCCTT ATCCTTCTCG
TATAAGTTCG GGAAAAACAC CTTCTCTTCG CGTAAAAGGC AGACGGCGAG TGAGGAAGAA
AGAAGAAGAG CCAACTAA
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| Protein sequence | MMKTILPIFI LISFTLSAAA QQNRPDTMKV QQLKDIVVTS RLPQVERRND KVIFNVQNSI
LASGSTVWDA LRKAPGIQTN ENGQVTQGTK SMTVYIDGKQ VQMTGEDLTA YLSGLPADNV
SRIEIMRTPS AKYDIQGGGI VNIITKKSKA QGFNGTINGA YTQATFGSQT AGGTFNYKQN
KLNIYGNYGF SNKSIRRQMN TYTIYQTPDS YSDWRGKRTI DPVNKSHSYQ LGLDYDINPR
QVFGFRVTGF NSDRNTDSRT ITNVFNDHVS VADSTLNTNV RSNSASNNYS FNLNYKLKLD
SAGNSLNIDV DYVPYANNSR QYVNALTYIQ DKNLNNNFNI FTPSTQRINI WSGKADLTYK
IAGKWAMESG IKYTSIASDN LFLYNNVLEG AFSPDDGKSN NFKYTENTAA AYTSISGTLG
KWDLQAGLRG EHTRTTGNSI TQQLITRRNY LRLFPTLFIT YKASEDHVFS FNYNSRMERP
AYMQLNPARS YSSPYSFQQG NPALRPAIFR SGELSYTFKQ NYTLTASYSK LQDLVSNVTV
QDNVSKTFYD TQQNLDNIED YTLGFMTNLR PTDWWDMNVT IEGAYRKQHS MYTDGYFSSD
DYILYLNTTQ SFVLSKKHGI KAELSGRYES PVYQGVYHVD RTSDISLGFS KSILKQQGTV
KLAFADIFYK NPYKLDIAYL QQRNGMIQKN DTRNVSLSFS YKFGKNTFSS RKRQTASEEE
RRRAN
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