| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2690 |
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| Symbol | |
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| ID | 8358850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3289171 |
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| End bp | 3290421 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964872 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003122373 |
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| Protein GI | 256421720 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0257934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATA AAATAAAAAA CCTCTTCGTA ATAACAATTG CAAGCGTGAT GGTAGTAACC
TTCAGCGCCT GCGGAGGAAA GAAAGCAGCA GAAACGAATA CAACAGGAGA AGAAGGACAT
ACAGAAAACG AAAATATAGT AGAGGTCACA CCGGCACAAT ACCAGTCAGT CGGTGTGAAA
CTGGGTGCGG CTGAAATGAA AGCGATCAGT GGTCTGCTGA AAGTGAATGG CTATATTGAT
GTGCCTCCGC AAAACCTGGC AAGCGTCACC ACACAAATGG GGGGAATCAT CAAATCAACG
CCGCTGTTAC AGGGAAGTAC GGTTAAAAAA GGAGAGGTGA TAGCGGTACT GGAAAACCAG
GACTATGTGC AGTTGCAGCA GGACTACCTG GAAAGTAAAA GCCAGCTGGA ACTGACTGAC
GCGGAATACG AGCGCCAGCA GACACTCGCC AGCGAGAACG TAAACTCAAA AAAAGTCCTG
CAGCAGGCAA AAGCACAATA CCAGGTTGCC CAGGCAAGAG AAAGTGCGTT TCGCCAGCGC
CTGCAGCTGA TTAATATCGA TGCGTCTTCG TTGACACCTT CCAACATACG GAGCCGTGTA
AACGTCTATT CTCCCGTAAG TGGTTATGTA ACAAAAGTGA ACGTTAATGG CGGGAAATTT
GTTAATCCTA ATGATGTGAT GTTTGAAATA GTAGACGGCG CAGATCTTCA TGTGGAGCTG
AACGTATTCG AGAAAGATGC AGTCATGGTG AAACCCGGTC AGCGGGTACG CTTTACACTG
GCGGGCGAAA CGACTGAACA GATAGCAACC GTGCAGCTGG TGGGGCGGGA GATCAGACCT
GATAAAACTG TCACTGTCCA TGCAATTGCG GATGGCGGCA GTAAGGCATT CCTGCCGGGA
ACCTACCTGA AAGCCCTGAT AGAAACCGGC GAAACGCAGG CGCTTGCCTT GCCGGAAAAC
GCCATTGTAG ATTTCAGTGG AAAGAAATAC ATATTTGTCG AAACTGTGGC GCCGGCTGGT
GAGCATACCT CTAAGGAAAA GGCATCTGCC AGTGGAGACA TGGGGACGCC AGTAACAGGT
ACAGAAAAAA TACACTATTT TGAAATGATC GAAATCGCTG TTGGGAATGC TGATGGAGGT
TTTGTGCAGG TGGAACTACC AAAAGATAGA AATGTAAATG GTAAAATCGT TCTTAATGGT
GCATACGACC TGTTGTCAAA ACTAAAGAAC AGTGAAGAAG AAGGACATTA A
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| Protein sequence | MNNKIKNLFV ITIASVMVVT FSACGGKKAA ETNTTGEEGH TENENIVEVT PAQYQSVGVK
LGAAEMKAIS GLLKVNGYID VPPQNLASVT TQMGGIIKST PLLQGSTVKK GEVIAVLENQ
DYVQLQQDYL ESKSQLELTD AEYERQQTLA SENVNSKKVL QQAKAQYQVA QARESAFRQR
LQLINIDASS LTPSNIRSRV NVYSPVSGYV TKVNVNGGKF VNPNDVMFEI VDGADLHVEL
NVFEKDAVMV KPGQRVRFTL AGETTEQIAT VQLVGREIRP DKTVTVHAIA DGGSKAFLPG
TYLKALIETG ETQALALPEN AIVDFSGKKY IFVETVAPAG EHTSKEKASA SGDMGTPVTG
TEKIHYFEMI EIAVGNADGG FVQVELPKDR NVNGKIVLNG AYDLLSKLKN SEEEGH
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