| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2679 |
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| Symbol | |
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| ID | 8358839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3274268 |
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| End bp | 3274720 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964861 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003122362 |
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| Protein GI | 256421709 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.252618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGCAGT TATCTGGCCG TAGTAATCTG AAAGATCTGT ATTGTATGCT TACCCGGATA
TTCCTGACCG TGCCGGTAAT TATTGCCCAG TACTATATCT CAACGGCCGC CGGTAAATTG
ACGGAGCCGA ATACGATCAG GGAAATCAGC AGGTTGCCGC TTACGGGTAT ATACGCCGAA
TGGCGTGATG TAGGTGTTAG CGTCGGTGCT TCAGGTGCAG TATTCGGATT GTATGGTGTG
TTTGTTGCAC CATTGATTAC GAAAGTTTAT CCACCGGAGA TAGCCAGGAC CGCACTTGTG
AGCACCCTGG TTTTTATCGC GTATAACCTG ATCATGGGTA TGACAGGCGA TATTGATAAT
GCTGCGCATA TTGGTGGATG GCTCAGCGGC TTCGTGATAG GATTGATTTT ATACCCAACA
CTAAAGCAAG CGGTAAATAA ACATACAGAT TAA
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| Protein sequence | MLQLSGRSNL KDLYCMLTRI FLTVPVIIAQ YYISTAAGKL TEPNTIREIS RLPLTGIYAE
WRDVGVSVGA SGAVFGLYGV FVAPLITKVY PPEIARTALV STLVFIAYNL IMGMTGDIDN
AAHIGGWLSG FVIGLILYPT LKQAVNKHTD
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