| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2656 |
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| Symbol | |
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| ID | 8358816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3244210 |
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| End bp | 3244962 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644964838 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003122339 |
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| Protein GI | 256421686 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.81917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACGG CTATCATCGT AGATGACGAA ATCATCAATA TCAATAACCT GCGAGCCTTA
CTCAACAGAC ATTGTAAGGC GATCGAAGTA ACGGGATCTG CGATGAATGC AGCGGCTGCA
AGAAAGGCTA TTATGCAGCT TAAACCGGAC GTTGTCTTCC TGGATATCGA GATGCCGGAC
GAAAATGGCT TTGACCTGTT AAGGTCCATC AAGGAGATTG ACTTTGAAGT GGTGTTTGTG
ACCGCATACG ATGCCTATGG CATCATGGCG GTGAAATTCT CTGCCCTGGA TTACCTGCTG
AAGCCTATCA ATATCGAAGA ACTAAAGATC ACCGTCAGTA AAATAGAGGA GTCTGTCAAT
AGCAAAAACC AACACCAGCG ACTTGGTAAT CTGCTACATT TACTGGATCA GCAGCAGCCG
GATGCCTACC AGAAGATTGC CTTACCGACA CAAAAAGAGA CCTTTTTTGT ACCGGTAAAG
GAGATTATCC GGTGTGAGTC ATCCAATAAC TATACAACCT TTTTTCTTAC CAATGGCAGT
GAACACCTGA TATCAAAACC CCTCTATGAA TATGAGGAAT TACTAAGCCC CTATGGGTTT
ATTCGCTGTC ATCAATCACA CCTGGTAAAC CGCATACATG TAACAAGTAT GCTGAATGAA
GACGCCGGTT ACCTGATCCT GCAGGATACG GCAAAGAAGA TCCCTATTTC AAAGCAAAGA
AAGAGTCTGG TGAAATCCTT ACTCCGTATG TAA
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| Protein sequence | MITAIIVDDE IININNLRAL LNRHCKAIEV TGSAMNAAAA RKAIMQLKPD VVFLDIEMPD
ENGFDLLRSI KEIDFEVVFV TAYDAYGIMA VKFSALDYLL KPINIEELKI TVSKIEESVN
SKNQHQRLGN LLHLLDQQQP DAYQKIALPT QKETFFVPVK EIIRCESSNN YTTFFLTNGS
EHLISKPLYE YEELLSPYGF IRCHQSHLVN RIHVTSMLNE DAGYLILQDT AKKIPISKQR
KSLVKSLLRM
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