| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2648 |
|---|
| Symbol | |
|---|
| ID | 8358808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 3238995 |
|---|
| End bp | 3240017 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644964830 |
|---|
| Product | Alcohol dehydrogenase zinc-binding domain protein |
|---|
| Protein accession | YP_003122331 |
|---|
| Protein GI | 256421678 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.131768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAC AAAAAGCAGT TATTCAATTA CAGTATGGGA ATAGCAGAGA TGCTTTAATA
TTCTCTGATA CACATCCGGT AAATGAGTTG ATGGCAGACG AGGTAAAGAT CAGGGTGTAT
GCAACTTCAG TAAACCCGAT TGACTGGCAG ATGATGGAAG GAAACAGGCG TTTAATTCAT
AAACGTACGT TTCCCTTTGT TCCTTTTTTT GATATCGCAG GTGATGTTGT TGCTGTCGGA
TCATCGGTCA GGAGATTTAA AACAGGGGAT GCCGTATACT GTGATAACAA AATAAACGGC
GGCGGTCTTT CTGAATATGT GAACGTGAAA GAAGACCTGG TCAGTATAAA ACCTGCAAAC
ATCAGTTATG CAGCGGCGGC GGCTGTTCCT TTGGCGGCGC AGACGGCATA TCTGGCGCTT
ACAAAAGGCG GATTGACAAA GAATAGCCGT GTTTGTATTA TAGGCGCCTC CGGAGGCGTA
GGATCTTTTG CCGTACAAAT CGCAAAAGCA CTTGGCGCAT CAACAGTAAT CGGTGTGTGT
AGTAAGAAGA ACAGCGATTT TGTCAGATCC TTAGGCGCAG ATATTACCGT TGACTATACC
ACTACAAAGT GGGCCGGTCT GCTGGATAAA AATTCACTGG ATATGGTGAT AGACTGTGTT
GGTGGTAAGG AACAATGGCT AGATGCCAAA AAAGTGCTCC GTTCTCAGGG GCGGTTTGTT
ACGATAGCAA GAGATGAAGA TGAAAAGGTG ACTGTGCCCT CCGCCCTGAA ATTAGCCGTC
AATATAGGCT TAAGAATGAT AAGTGCTTAT TTCGGAAGAA AAATTGCCTA CGTACCGGTT
TTTCTGGATG CCTCACACAC ACTGTTGGAC AAGGTAAGTG AGCTCATACA AGCGGGCAGG
ATCAATCCCT GGTTAGGTAA GATATATACA TTTAATATGG ACAATGTGCA TCAGGTTATT
CAGGAAAGTA AAACAGGAAG GATGGTCGGC AAGACGGTTA TCCAGATTGC CGGTGACAAA
TGA
|
|---|
| Protein sequence | MDKQKAVIQL QYGNSRDALI FSDTHPVNEL MADEVKIRVY ATSVNPIDWQ MMEGNRRLIH
KRTFPFVPFF DIAGDVVAVG SSVRRFKTGD AVYCDNKING GGLSEYVNVK EDLVSIKPAN
ISYAAAAAVP LAAQTAYLAL TKGGLTKNSR VCIIGASGGV GSFAVQIAKA LGASTVIGVC
SKKNSDFVRS LGADITVDYT TTKWAGLLDK NSLDMVIDCV GGKEQWLDAK KVLRSQGRFV
TIARDEDEKV TVPSALKLAV NIGLRMISAY FGRKIAYVPV FLDASHTLLD KVSELIQAGR
INPWLGKIYT FNMDNVHQVI QESKTGRMVG KTVIQIAGDK
|
|---|
| |