Gene Cpin_2641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2641 
Symbol 
ID8358801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3232285 
End bp3234096 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content45% 
IMG OID644964823 
Producthypothetical protein 
Protein accessionYP_003122324 
Protein GI256421671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGG TTTTATTACA AAAAAATATC ACAACTGAAC AGCGGGTGAT GACCCTCAGT 
CTGCTCGCAA GGGCAAAATC TATTACAGAA ACTGATCATG CAATCAGCCT GGGCTTACAG
GCTGTTCAAC TCAGTCGCTC ACTTTCAGAT GTACAACATA CCGCAATGGC ATATGCCATA
TTGGCGCCTA TCTATCTGCA AAAAAATGAC CTCACTGCTG CTGCACAGAT GGTAGATAGT
GCTGTCTTTT ATGCTACAAT GACTGAGAAT GCCCTGGCAA AAGGAATCGC CTGGTATAGA
AAAGCCTGGA TGGAAAACCT GCAGGGAAAG CCGCAGGAAG CACTCATAAG CGCACAACAG
TCATTAAAAT ACCTGGAGCA AAGCAAAGAT GTAAACTATC AGTCTTCTGT CTATTATATT
ATCGCCAGTA TATATGCGAA CCTGTATGAT AGTCCCCTGC ATAAGAAATA CGCGCAGCTA
TGTTTGCAGG CTGCCATTAA AGACATGGAC TATGATAACA TCCTCATGGC CTATCAGACT
TTAGGCACCT ACTGGCAATA TTATCACATG GAACACCAGG ATGACCGCTC CGCACTGGAT
GCAGCCTTCT TCTACAACAG GGTAGCTATG CAGCTCTTCC TGGCCCGGAA AGACCGTATG
ATCTTTCATA GCACCATGGC CATTATAGCG CTCAATACCG CAGATCTCTA TGCACAGAAT
CTCCCGGCGT CCTATCGTGA CAGCGTATTT TATTACCTCG ACTTTGCACA GAAGATAGGC
ATGGAAACCC ATCATCTTGA GGTAGTGGCC AACTGTTATG GTATGAAAAG CGACTATGAA
GTAGCCGCAG GTAATTATCA AAAAGCAGAA GGTCTCTTGC TGAAAGGACT GGAATTTGTG
AATGCCGACA GTGCGCGGAA CCTGGCTACC AAGGTACAGT TTATGAGCTC ATTGGCAACA
GTGGCCGAAA AACAAGGGCA CTATAAAGAA GCCTACGAAT ACCAGCAGAA ATATGCAGCC
TTGTATACGG ACCTGTATAA TGAAGAAAAG ATGAATATGA CGAAGGAGCT GGAAGCAAAA
TACCAGGCAG AAAAAAATGC AACGGCACTC AGGACCTTAG AACAGACCGC CATATTGCAT
AAAAGACTAG GCTATCTGTA TATTGGTCTG GGACTGGCCT CTGTGGCCGC TGCCGTCTTT
CTTTTCAGAT CCCTGCGATT CCGTTTGCGC CTGGTGCAGA AAGAAAAAGA AGATGCCGCT
TTACTCGCAC AGCTGAAACA GAATGAGAAC AGGCAATTGG CCATGGAAAA ACAGGAAGCC
GAATTACAGG CCCGTCTCAG TGAAGAAGAA GCCATGCGGC TGATCGCAGA ACATGAGCTC
TTACAGGAAA GACAGGAACG CTTAGAAAAA GACCTCCTGG CCGGTACCCT GCAGGTAGAA
CAAAAAACAG TTTTGCTGCA AACCCTGCAA CAGACAATTG CCAGGAACAG GAATGATAAA
TCTGTGTTAT CACAACTCAA CCATATCATC GAGCATGATA AAAAGCTGGA TGAATCCTTC
GCAGATAATA AAGCTGATTT TGATAACATC AGCCCTGAAT TCTTTGAGAA GTTAAAAGAA
CGGTCTGCGA ATATGCTCTC CCGATTGGAC CTGAAACATT GCTCCTACAT TTACCTTGGA
CTCACCAACA AGGAAGTAGC ACAGCGACTG GGTATTGCGC CTAAAAGTAT CATTATGGCG
CGTTACCGCA TTAAACTGAA GTTAAGTCTG GCAAAAGAAG AAGAACTGGA TGAATATATC
CGTTCCCTGT AA
 
Protein sequence
MSRVLLQKNI TTEQRVMTLS LLARAKSITE TDHAISLGLQ AVQLSRSLSD VQHTAMAYAI 
LAPIYLQKND LTAAAQMVDS AVFYATMTEN ALAKGIAWYR KAWMENLQGK PQEALISAQQ
SLKYLEQSKD VNYQSSVYYI IASIYANLYD SPLHKKYAQL CLQAAIKDMD YDNILMAYQT
LGTYWQYYHM EHQDDRSALD AAFFYNRVAM QLFLARKDRM IFHSTMAIIA LNTADLYAQN
LPASYRDSVF YYLDFAQKIG METHHLEVVA NCYGMKSDYE VAAGNYQKAE GLLLKGLEFV
NADSARNLAT KVQFMSSLAT VAEKQGHYKE AYEYQQKYAA LYTDLYNEEK MNMTKELEAK
YQAEKNATAL RTLEQTAILH KRLGYLYIGL GLASVAAAVF LFRSLRFRLR LVQKEKEDAA
LLAQLKQNEN RQLAMEKQEA ELQARLSEEE AMRLIAEHEL LQERQERLEK DLLAGTLQVE
QKTVLLQTLQ QTIARNRNDK SVLSQLNHII EHDKKLDESF ADNKADFDNI SPEFFEKLKE
RSANMLSRLD LKHCSYIYLG LTNKEVAQRL GIAPKSIIMA RYRIKLKLSL AKEEELDEYI
RSL