Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2641 |
Symbol | |
ID | 8358801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3232285 |
End bp | 3234096 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644964823 |
Product | hypothetical protein |
Protein accession | YP_003122324 |
Protein GI | 256421671 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGGG TTTTATTACA AAAAAATATC ACAACTGAAC AGCGGGTGAT GACCCTCAGT CTGCTCGCAA GGGCAAAATC TATTACAGAA ACTGATCATG CAATCAGCCT GGGCTTACAG GCTGTTCAAC TCAGTCGCTC ACTTTCAGAT GTACAACATA CCGCAATGGC ATATGCCATA TTGGCGCCTA TCTATCTGCA AAAAAATGAC CTCACTGCTG CTGCACAGAT GGTAGATAGT GCTGTCTTTT ATGCTACAAT GACTGAGAAT GCCCTGGCAA AAGGAATCGC CTGGTATAGA AAAGCCTGGA TGGAAAACCT GCAGGGAAAG CCGCAGGAAG CACTCATAAG CGCACAACAG TCATTAAAAT ACCTGGAGCA AAGCAAAGAT GTAAACTATC AGTCTTCTGT CTATTATATT ATCGCCAGTA TATATGCGAA CCTGTATGAT AGTCCCCTGC ATAAGAAATA CGCGCAGCTA TGTTTGCAGG CTGCCATTAA AGACATGGAC TATGATAACA TCCTCATGGC CTATCAGACT TTAGGCACCT ACTGGCAATA TTATCACATG GAACACCAGG ATGACCGCTC CGCACTGGAT GCAGCCTTCT TCTACAACAG GGTAGCTATG CAGCTCTTCC TGGCCCGGAA AGACCGTATG ATCTTTCATA GCACCATGGC CATTATAGCG CTCAATACCG CAGATCTCTA TGCACAGAAT CTCCCGGCGT CCTATCGTGA CAGCGTATTT TATTACCTCG ACTTTGCACA GAAGATAGGC ATGGAAACCC ATCATCTTGA GGTAGTGGCC AACTGTTATG GTATGAAAAG CGACTATGAA GTAGCCGCAG GTAATTATCA AAAAGCAGAA GGTCTCTTGC TGAAAGGACT GGAATTTGTG AATGCCGACA GTGCGCGGAA CCTGGCTACC AAGGTACAGT TTATGAGCTC ATTGGCAACA GTGGCCGAAA AACAAGGGCA CTATAAAGAA GCCTACGAAT ACCAGCAGAA ATATGCAGCC TTGTATACGG ACCTGTATAA TGAAGAAAAG ATGAATATGA CGAAGGAGCT GGAAGCAAAA TACCAGGCAG AAAAAAATGC AACGGCACTC AGGACCTTAG AACAGACCGC CATATTGCAT AAAAGACTAG GCTATCTGTA TATTGGTCTG GGACTGGCCT CTGTGGCCGC TGCCGTCTTT CTTTTCAGAT CCCTGCGATT CCGTTTGCGC CTGGTGCAGA AAGAAAAAGA AGATGCCGCT TTACTCGCAC AGCTGAAACA GAATGAGAAC AGGCAATTGG CCATGGAAAA ACAGGAAGCC GAATTACAGG CCCGTCTCAG TGAAGAAGAA GCCATGCGGC TGATCGCAGA ACATGAGCTC TTACAGGAAA GACAGGAACG CTTAGAAAAA GACCTCCTGG CCGGTACCCT GCAGGTAGAA CAAAAAACAG TTTTGCTGCA AACCCTGCAA CAGACAATTG CCAGGAACAG GAATGATAAA TCTGTGTTAT CACAACTCAA CCATATCATC GAGCATGATA AAAAGCTGGA TGAATCCTTC GCAGATAATA AAGCTGATTT TGATAACATC AGCCCTGAAT TCTTTGAGAA GTTAAAAGAA CGGTCTGCGA ATATGCTCTC CCGATTGGAC CTGAAACATT GCTCCTACAT TTACCTTGGA CTCACCAACA AGGAAGTAGC ACAGCGACTG GGTATTGCGC CTAAAAGTAT CATTATGGCG CGTTACCGCA TTAAACTGAA GTTAAGTCTG GCAAAAGAAG AAGAACTGGA TGAATATATC CGTTCCCTGT AA
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Protein sequence | MSRVLLQKNI TTEQRVMTLS LLARAKSITE TDHAISLGLQ AVQLSRSLSD VQHTAMAYAI LAPIYLQKND LTAAAQMVDS AVFYATMTEN ALAKGIAWYR KAWMENLQGK PQEALISAQQ SLKYLEQSKD VNYQSSVYYI IASIYANLYD SPLHKKYAQL CLQAAIKDMD YDNILMAYQT LGTYWQYYHM EHQDDRSALD AAFFYNRVAM QLFLARKDRM IFHSTMAIIA LNTADLYAQN LPASYRDSVF YYLDFAQKIG METHHLEVVA NCYGMKSDYE VAAGNYQKAE GLLLKGLEFV NADSARNLAT KVQFMSSLAT VAEKQGHYKE AYEYQQKYAA LYTDLYNEEK MNMTKELEAK YQAEKNATAL RTLEQTAILH KRLGYLYIGL GLASVAAAVF LFRSLRFRLR LVQKEKEDAA LLAQLKQNEN RQLAMEKQEA ELQARLSEEE AMRLIAEHEL LQERQERLEK DLLAGTLQVE QKTVLLQTLQ QTIARNRNDK SVLSQLNHII EHDKKLDESF ADNKADFDNI SPEFFEKLKE RSANMLSRLD LKHCSYIYLG LTNKEVAQRL GIAPKSIIMA RYRIKLKLSL AKEEELDEYI RSL
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