Gene Cpin_2611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2611 
Symbol 
ID8358771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3198384 
End bp3198914 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content42% 
IMG OID644964794 
ProductIsoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_003122295 
Protein GI256421642 
COG category[S] Function unknown 
COG ID[COG1755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.304902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCA TTACCACAAC AATCTTTTTC ATTACCGTTA TCGCACGTTT TATTAGTGTG 
GCTATCTCTG GTTCAAACGA GCGTAAGCTT AAAAAAATGG GCGCCGTGGA GTACGGTAAA
AAGAATTCCA CCTTACTGGT GCTGGCGCAT ACGCTTTATT ATGTTGCCGC CGCAACAGAA
GGATCGCTGA GAGGCGCCTT TTTTGATGAT ACCGTCAGCT ATCTCGGACT GGGTATTTTT
GTAGCGGCCA TTGGTATGCT GTATTATGTG ATTTATTCGA TCAGACACGT ATGGACTGTC
AAACTGATCA TTGCACCTCC CGGCTACCAC GCTATTAATA AGTCCGTATT ATTTCGCCTG
GTAAAACATC CGAATTATTA CCTGAATATT ATACCGGAAC TGATTGGTCT GGCTATTTTC
TTCCATGCCT GGATAACGCT GATAGCAGGA TTAATGATCT ATCTGATCCC GCTGGTAAAC
AGGATAAAGG AAGAGGAAAG GGTGATGAAA TCAACATTTA CAGAATACTA A
 
Protein sequence
MNTITTTIFF ITVIARFISV AISGSNERKL KKMGAVEYGK KNSTLLVLAH TLYYVAAATE 
GSLRGAFFDD TVSYLGLGIF VAAIGMLYYV IYSIRHVWTV KLIIAPPGYH AINKSVLFRL
VKHPNYYLNI IPELIGLAIF FHAWITLIAG LMIYLIPLVN RIKEEERVMK STFTEY